| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2346 |
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| Symbol | |
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| ID | 4623552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2854807 |
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| End bp | 2856189 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639797485 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_943684 |
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| Protein GI | 119946004 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00458496 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCTTACT CCCGAGAAAT AAGAAAAATA CTCAAGCTAA GTTTCCCTAT TTTTATCGCA
CAATTTGCAC AAACGGCCAT GGGTTTTGTA GATACTGTGA TGGCCGGTGG TGTTAGCGCA
AATGACATGG CTGCAGTAGC TATTGCCACC AGCATTTGGT TACCCTGTAT TTTGTTTGGC
GTCGGTGTGT TAATGGCACT TATTCCCCTC ACGGCGCAAG CCCATGGTGC CAACGATATA
GAAAATATTC CCAGTATTGG CCAACAGGGG TTGTATTTGG CTTTATTACT CAGCATCCCC
ACCTTCTTGA TTTTATATAA TGCCAGTTAC CTTATCAATA TCATGGATAT GGATCCCATT
TTAAAAGATA TTACTACTCG CTATCTGTAC GCTATTTTAT CCGCCATACC GGCTTTTTTA
TTATTCCAGG CACTGCGTAA CTATATAGAA GGTCTGTCAC TGACGAAACC TGCAATGGTG
ATAGGTTTTA TGGGATTAAT CATTAATATT CCACTGAACT GGATTTTTGT CTATGGGAAA
TTAGGGCTTC CGGCAATGGG TGGTGCAGGA TGTGGCGTCG CAACTAGCCT CGTTTATTGG
CTAATGCTGT CGGCGCTCAC GGGTTATGTA TGGCATACTA AAAAACTTCA GTATACCCCT
TTATTTAAAC GCTTCTCTGC CATTAACTTG AGAACACAAT TAGCCATCTT TAGCCTCGGT
TTACCCGTTG CAATCGCATT ATTTTTTGAG ATCTCTATTT TTGCGATCGT CGCGCTATTA
ATCGCACCAT TAGGCGCAAA CATAGTGGCG GCCCATCAAA TTGCGATCAA TTTTTCCAGC
ATGGTCTTTA TGCTCCCCAT GAGCATCGCC AATGCGGTCA GTATTAGGGT TGGTTTTAAC
TTAGGACAAA AAAATAAAGC AGAGGCCAAA AATGCCAGTT ATGCTGGGTT TATTGTCGGT
TTATCGCTCT CAGTGATAAC CGCATTATTA ACCTTGATAT TCAAGGAGCA GATCGCACAG
CTTTACACGG ATGACCCGAA GGTGATTTTA TTAGCCGTTA CCCTAATAAT ATTTTCTGCA
ATGTACCAGT GTGTTGATGC CATTCAGGCG GTAGCAGCTG GTGCCCTGCG TGGTTACAAA
GAGATGAAGG CGATATTTTT ACGTACCTTT ATTGCGTATT GGATGATTGG ATTACCCCTT
GGTTATAGCC TGGCAATGAC GGATTTATTT ATGCCCGCAC TTGGCGCAAA AGGGTTTTGG
ATTGGTATTA CGGCAGGTTT AACGTCTGCC GCTATATTAT TAGGAAGGCG TCTCTGGGTC
GTGCAAAAGT GCTCAGCAGA ACTGTGCCAA GCAGATAAAT CTGTTGCGAA TAATTGTTAT
TAA
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| Protein sequence | MPYSREIRKI LKLSFPIFIA QFAQTAMGFV DTVMAGGVSA NDMAAVAIAT SIWLPCILFG
VGVLMALIPL TAQAHGANDI ENIPSIGQQG LYLALLLSIP TFLILYNASY LINIMDMDPI
LKDITTRYLY AILSAIPAFL LFQALRNYIE GLSLTKPAMV IGFMGLIINI PLNWIFVYGK
LGLPAMGGAG CGVATSLVYW LMLSALTGYV WHTKKLQYTP LFKRFSAINL RTQLAIFSLG
LPVAIALFFE ISIFAIVALL IAPLGANIVA AHQIAINFSS MVFMLPMSIA NAVSIRVGFN
LGQKNKAEAK NASYAGFIVG LSLSVITALL TLIFKEQIAQ LYTDDPKVIL LAVTLIIFSA
MYQCVDAIQA VAAGALRGYK EMKAIFLRTF IAYWMIGLPL GYSLAMTDLF MPALGAKGFW
IGITAGLTSA AILLGRRLWV VQKCSAELCQ ADKSVANNCY
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