Gene Ping_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2332 
Symbol 
ID4627118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2835194 
End bp2836975 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content46% 
IMG OID639797472 
ProductABC transporter ATP-binding and permease protein 
Protein accessionYP_943671 
Protein GI119945991 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.83663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAT CTCCAGATCT CGCCTACCTT AAGCATTTCT ATTATTACGC TTCGTGCTAC 
AAAAAAACCG CACTGATTGG TTTGCTGATG ATGCCGATAT CGGTAGCCGC CAACGTATTA
TTTCCCTGGC TGGTTATTCA AGTAATCGAT CAGCACCTTA CCCCAGGTAA ATACGCCGGG
CTGATGTTCC TGATTGCTGT CATGGTGGTG GTGTTGATTG TTAATTACAT TGCCGATGGA
ATCTATACAT ACTGCTTGCG CATGACCGGG CAGAAAGCCG TTTTCGATAT GAGGATGGCG
TTGTTTGGGC GCATTTTGAA ACTGCCCAGA ACCTATTTTG ATAAAACGCC CGCGGGAGTG
ACTTTGTCGC GATTGACCAG CGATCTTGAA GCCATTGGTG AGTCCTTTGT ACTGGGCGTA
CTGAATTTGG TAAAAGACTC GATCAACACC CTAGCGGTGC TGATTTTTAT GTTTTTTATC
AACTGGCAAT TAGCCTTGTT GGTGTTGCTG GTGTTTCCGC CTGTACTACT GCTAACCCAG
TATGTCCGTA ATCGCCTGCG TGAAATGTAT AGCATCACAC GCTCATCTTT GGCCAAAGGG
ACAGGCTTTC TGCAAGAGTG TTTGTTGGGG GTCAAAACCG TTCAACTGTA TGGCGCCGAA
GAGGACGTAG AATCCAAGTA TCAAGGTTAC ACAGAAGATT TCCTGCGGGC GCAATTAAAA
ACCAATAAAT ACGATGCCAC CTTATTTTCG ATTATAACCG GCATCACTAG CATCACCATC
GGACTGATTA TTTGGTATGG CTCCGGTAAG GTTCTCGAGG GAATTATCAG CCTTGGCGTC
TTGATAGCCT TTATCAATAC GTTGGAAAAA GTGTTTGTGC CTCTGCGGGA TTTTACCTCG
CAAATCGCGG CTATCCAGCG TTCTTTTGCG GCCTTTGAGC ACATTGAAGA ACTTTTTGAG
GAAGTCCTAG AAGAACAAGG GCGAACGCTG TTGCCAGCAG ACACGATAAA AGAAAAGCTG
GCTAATTTTG AGTCTCTGGA ATTCAAAAAT GTACGTTTCC GTTATGGCGG CACAGGTCCC
TACGTTTTGG ATGACGTGTC CTTTCGACTC AACAAAGGCG AGCAATTAGC TTTGGTCGGC
ACGACCGGCT CAGGCAAGTC GACGATCATT CGTATTATGA GTAAAACCTA TATGGACTAT
CAAGGCAGTA TTCTGCTCAA TGGCCTTGAG CTGTCGAGCA TTCCCAAAGA CTCAATGTCG
CACTTGTTTT CTCTAATGCA GCAGGACGTC TTTCTATTTG AGAAGAATAT TCAATTTAAT
ATATCCCTTG GTGCTCCCGA AATCAGTAAC GATGCGGTGA TCGATGCTGC GGAATACGTT
TATGCCCACG ACTTTATTTT GGAGCTGCCG GATCAGTACC AATTTGAGCT GAAAAAAAGC
GGCAGTAATT TGTCGGCAGG CCAAGCTCAG CTGATCTCCT TTGCTCGGGT TGTGGCTCAG
GGCGGACAGG TAATGATGTT GGATGAGGCC ACCAGTTCCG TGGATTCCAT TACCGAGAAT
CTAATCCAAA AAGCCATCGG GCGCTTGTTT GAGGAAAAGA CCGTGATCGC CATTGCTCAC
CGTCTGAGTA CCATTCGCCA CTCAGATCAA ATTTTGGTGC TCAACCAAGG CAAGATTGTG
GAACAGGGCA ACCACCAGGC GTTGCTGGCA ATAAATGGCG TTTACTCGCG CTTACTCAAT
ACTGAAGTCA ACAATAGCCC AATTTTGACA AAGTCGACCT GA
 
Protein sequence
MIKSPDLAYL KHFYYYASCY KKTALIGLLM MPISVAANVL FPWLVIQVID QHLTPGKYAG 
LMFLIAVMVV VLIVNYIADG IYTYCLRMTG QKAVFDMRMA LFGRILKLPR TYFDKTPAGV
TLSRLTSDLE AIGESFVLGV LNLVKDSINT LAVLIFMFFI NWQLALLVLL VFPPVLLLTQ
YVRNRLREMY SITRSSLAKG TGFLQECLLG VKTVQLYGAE EDVESKYQGY TEDFLRAQLK
TNKYDATLFS IITGITSITI GLIIWYGSGK VLEGIISLGV LIAFINTLEK VFVPLRDFTS
QIAAIQRSFA AFEHIEELFE EVLEEQGRTL LPADTIKEKL ANFESLEFKN VRFRYGGTGP
YVLDDVSFRL NKGEQLALVG TTGSGKSTII RIMSKTYMDY QGSILLNGLE LSSIPKDSMS
HLFSLMQQDV FLFEKNIQFN ISLGAPEISN DAVIDAAEYV YAHDFILELP DQYQFELKKS
GSNLSAGQAQ LISFARVVAQ GGQVMMLDEA TSSVDSITEN LIQKAIGRLF EEKTVIAIAH
RLSTIRHSDQ ILVLNQGKIV EQGNHQALLA INGVYSRLLN TEVNNSPILT KST