Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2332 |
Symbol | |
ID | 4627118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2835194 |
End bp | 2836975 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639797472 |
Product | ABC transporter ATP-binding and permease protein |
Protein accession | YP_943671 |
Protein GI | 119945991 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.83663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAT CTCCAGATCT CGCCTACCTT AAGCATTTCT ATTATTACGC TTCGTGCTAC AAAAAAACCG CACTGATTGG TTTGCTGATG ATGCCGATAT CGGTAGCCGC CAACGTATTA TTTCCCTGGC TGGTTATTCA AGTAATCGAT CAGCACCTTA CCCCAGGTAA ATACGCCGGG CTGATGTTCC TGATTGCTGT CATGGTGGTG GTGTTGATTG TTAATTACAT TGCCGATGGA ATCTATACAT ACTGCTTGCG CATGACCGGG CAGAAAGCCG TTTTCGATAT GAGGATGGCG TTGTTTGGGC GCATTTTGAA ACTGCCCAGA ACCTATTTTG ATAAAACGCC CGCGGGAGTG ACTTTGTCGC GATTGACCAG CGATCTTGAA GCCATTGGTG AGTCCTTTGT ACTGGGCGTA CTGAATTTGG TAAAAGACTC GATCAACACC CTAGCGGTGC TGATTTTTAT GTTTTTTATC AACTGGCAAT TAGCCTTGTT GGTGTTGCTG GTGTTTCCGC CTGTACTACT GCTAACCCAG TATGTCCGTA ATCGCCTGCG TGAAATGTAT AGCATCACAC GCTCATCTTT GGCCAAAGGG ACAGGCTTTC TGCAAGAGTG TTTGTTGGGG GTCAAAACCG TTCAACTGTA TGGCGCCGAA GAGGACGTAG AATCCAAGTA TCAAGGTTAC ACAGAAGATT TCCTGCGGGC GCAATTAAAA ACCAATAAAT ACGATGCCAC CTTATTTTCG ATTATAACCG GCATCACTAG CATCACCATC GGACTGATTA TTTGGTATGG CTCCGGTAAG GTTCTCGAGG GAATTATCAG CCTTGGCGTC TTGATAGCCT TTATCAATAC GTTGGAAAAA GTGTTTGTGC CTCTGCGGGA TTTTACCTCG CAAATCGCGG CTATCCAGCG TTCTTTTGCG GCCTTTGAGC ACATTGAAGA ACTTTTTGAG GAAGTCCTAG AAGAACAAGG GCGAACGCTG TTGCCAGCAG ACACGATAAA AGAAAAGCTG GCTAATTTTG AGTCTCTGGA ATTCAAAAAT GTACGTTTCC GTTATGGCGG CACAGGTCCC TACGTTTTGG ATGACGTGTC CTTTCGACTC AACAAAGGCG AGCAATTAGC TTTGGTCGGC ACGACCGGCT CAGGCAAGTC GACGATCATT CGTATTATGA GTAAAACCTA TATGGACTAT CAAGGCAGTA TTCTGCTCAA TGGCCTTGAG CTGTCGAGCA TTCCCAAAGA CTCAATGTCG CACTTGTTTT CTCTAATGCA GCAGGACGTC TTTCTATTTG AGAAGAATAT TCAATTTAAT ATATCCCTTG GTGCTCCCGA AATCAGTAAC GATGCGGTGA TCGATGCTGC GGAATACGTT TATGCCCACG ACTTTATTTT GGAGCTGCCG GATCAGTACC AATTTGAGCT GAAAAAAAGC GGCAGTAATT TGTCGGCAGG CCAAGCTCAG CTGATCTCCT TTGCTCGGGT TGTGGCTCAG GGCGGACAGG TAATGATGTT GGATGAGGCC ACCAGTTCCG TGGATTCCAT TACCGAGAAT CTAATCCAAA AAGCCATCGG GCGCTTGTTT GAGGAAAAGA CCGTGATCGC CATTGCTCAC CGTCTGAGTA CCATTCGCCA CTCAGATCAA ATTTTGGTGC TCAACCAAGG CAAGATTGTG GAACAGGGCA ACCACCAGGC GTTGCTGGCA ATAAATGGCG TTTACTCGCG CTTACTCAAT ACTGAAGTCA ACAATAGCCC AATTTTGACA AAGTCGACCT GA
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Protein sequence | MIKSPDLAYL KHFYYYASCY KKTALIGLLM MPISVAANVL FPWLVIQVID QHLTPGKYAG LMFLIAVMVV VLIVNYIADG IYTYCLRMTG QKAVFDMRMA LFGRILKLPR TYFDKTPAGV TLSRLTSDLE AIGESFVLGV LNLVKDSINT LAVLIFMFFI NWQLALLVLL VFPPVLLLTQ YVRNRLREMY SITRSSLAKG TGFLQECLLG VKTVQLYGAE EDVESKYQGY TEDFLRAQLK TNKYDATLFS IITGITSITI GLIIWYGSGK VLEGIISLGV LIAFINTLEK VFVPLRDFTS QIAAIQRSFA AFEHIEELFE EVLEEQGRTL LPADTIKEKL ANFESLEFKN VRFRYGGTGP YVLDDVSFRL NKGEQLALVG TTGSGKSTII RIMSKTYMDY QGSILLNGLE LSSIPKDSMS HLFSLMQQDV FLFEKNIQFN ISLGAPEISN DAVIDAAEYV YAHDFILELP DQYQFELKKS GSNLSAGQAQ LISFARVVAQ GGQVMMLDEA TSSVDSITEN LIQKAIGRLF EEKTVIAIAH RLSTIRHSDQ ILVLNQGKIV EQGNHQALLA INGVYSRLLN TEVNNSPILT KST
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