Gene Ping_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2297 
Symbol 
ID4624615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2791474 
End bp2792859 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content41% 
IMG OID639797438 
ProductNa+-dependent transporter of the SNF family protein 
Protein accessionYP_943637 
Protein GI119945957 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTG ATACTCATGT TTCCAATCGA TGGTCAAGTC GATACGCGTA TATCTTAGCT 
GCAACGGGTG CTGCAGTTGG ACTGGGTAAT ATATGGAAAT TTCCCTATAT CATGGGTGAA
AATGGCGGTG GCGCGTTTGT TTTTGTCTAT CTTTTATGTA TATTTCTGAT CGGTGTCCCG
GTCATGATGG CCGAAGTTGT TATTGGTAAA CGTGGGCGTT CAACGCCTGC CAATGCTATG
ACTCATGTTG CAACCGAGTC GGGTCACTCA TCTCATTGGT CGATTATTGG CTCAATTGGG
GTGTTAGCGG GTTTCTTGAT TTTAAGTTTT TATGCGGTTA TTGCAGGTTG GGCAGCAGCT
TACGTGTTTT TTGCCGGTGC CGGCGAATTT AGCGCGGCGG CTGCGGATCC TGCTACTAAT
GCCGATGTAA TAGGGGCTTT ATTTACTGAT TTGATTACCA GCGTACCCCA ACTTCTTATC
TGGACAACCT TAACCATTGT CGCTGTTGTT TACGTGATCT CTAAAGGTGT CAAAGAGGGA
CTGGAAACGG CAATTACTTA TTTAATGCCG ACTTTATTTA TATTACTTTT TGGTATTATG
ATTTACTCGG CCATTGTGGG TGATTTTGCT GCTGCCTTTA CCTTTATGTT CCACATTGAC
TTTTCGCAAC TGACGATTGA AGGGGCATTA GTGGCATTAG GTCATGCCTT TTTCACCCTT
AGTTTAGCGA TGGGTATTAT GATGATTTAT GGCGCCTATT TACCTAAAGG CGTTTCAATT
GTTAAAACCT CAATGATGAT CGCTGTTGCT GATACTGTTG TTGCATTAAT TGCGGGACTT
GCTATTTACC CTATCGTGTT TGCGCATGGT TTGGAGCCAA GTGCCGGACC CGGGTTATTG
TTTCAATCAC TTCCTCTTGC CTTTGGTTCA ATGCCTTTTG GTGATTTTGT GGGGGTTTTA
TTCTTTGTGA TGGTGGTTTT TGCTGCATTC ACTTCTGCTA TTGCACTGCT TGAATCTCCT
ACTGCTTATT TAGTAGAGCG TCAAAATGTA AGTCGTACTA AAGCGGCTAT TATTGCAGGT
GCTGCAGTTT GGATATTGAG TTTATGTACT ATCTACTCAT TTGCCGGTGC GGAATGGACA
AAACTGTCTT TTGGTATGGG TGGGGATATA TTTGAGTTTT TAGATTACCT TACAGCCAAT
ATTTTATTGC CTCTGGGTGG CATATTAATA TCAATCTTTG CCGGTTGGGT CATTAAACCA
GAGATTTTAA AAGAAGAGTT TAACTTATCT GATAAATATT TTGCTATTGT ATTAACACTT
CTACGTTATG TTGCTCCAAT AGGTATTTTA CTCGTATTTT TAAATGCGAT AGGTCTTTTT
AAGTAA
 
Protein sequence
MNTDTHVSNR WSSRYAYILA ATGAAVGLGN IWKFPYIMGE NGGGAFVFVY LLCIFLIGVP 
VMMAEVVIGK RGRSTPANAM THVATESGHS SHWSIIGSIG VLAGFLILSF YAVIAGWAAA
YVFFAGAGEF SAAAADPATN ADVIGALFTD LITSVPQLLI WTTLTIVAVV YVISKGVKEG
LETAITYLMP TLFILLFGIM IYSAIVGDFA AAFTFMFHID FSQLTIEGAL VALGHAFFTL
SLAMGIMMIY GAYLPKGVSI VKTSMMIAVA DTVVALIAGL AIYPIVFAHG LEPSAGPGLL
FQSLPLAFGS MPFGDFVGVL FFVMVVFAAF TSAIALLESP TAYLVERQNV SRTKAAIIAG
AAVWILSLCT IYSFAGAEWT KLSFGMGGDI FEFLDYLTAN ILLPLGGILI SIFAGWVIKP
EILKEEFNLS DKYFAIVLTL LRYVAPIGIL LVFLNAIGLF K