Gene Ping_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2294 
Symbol 
ID4624612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2788158 
End bp2789189 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content45% 
IMG OID639797435 
Productdihydroorotase 
Protein accessionYP_943634 
Protein GI119945954 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAA CAAGAACAAT AACCCGCCCC GATGATTGGC ACTTGCATTT GCGCGACGGT 
GAAGTACTAA AGGACACTGT GCGTGATACC AGCCGTTATA TGGGCCGCGC AGTTATTATG
CCTAACCTTG TACCGCCCGT AACAAATACT GCATTAGCAC TTGCATATCA GGCCAGAATT
TTTGCGGCGC AGCCGAAGGC TGGCTTTAAA CCATTAATGA CCCTCTATTT AACCGATAAC
ACCAGCGCTG ATGAGATAAA AAAAGCCAAA GCATCGGGAC AAATTTATGC TGCCAAATTA
TACCCGGCAG GTGCCACTAC CAACTCAGAA TCAGGTGTTA CCTCGGTTGA AAAAATAAAA
GAGGCTCTGC AGGCGATGCA GGAGGTCGGC ATGCTGCTAC TGATTCACGG TGAAGTCACC
GCCAGTGACA TTGATATTTT TGACCGTGAG GAGATTTTCT TACAGAAAGT CCTTGCCCCG
ATCGTTGCAT CCTATCCCAA TCTGAAAATC GTTCTGGAAC ATATCACCAC GGCGAATGCG
GTAGACTTTG TTAATAATGC AGGCGACAAT GTTGCAGCAA CTATTACCGC CCACCATTTA
ATGTTTAACC GTAACCATAT GTTAGTAGGC GGAATTCGTC CACACTTATA CTGTTTACCT
ATTTTAAAGC GTAATATTCA CCAGCAAGCA TTAATAAAAG CTGCAACCAG TGGCGCTAAA
AAATTCTTTT TAGGCACCGA TTCTGCTCCA CACGCGGTTA ACCGTAAGGA AGCGGCTTGT
GGTTGCGCGG GGTGTTATAC CGCTCATGCA GCCATTGAAT TATATGCAGA AGTCTTTGAA
CAAGCCGGTG CATTGGATAA ATTAGAAGCC TTTGCCAGTT TTAACGGCCC TGATTTTTAT
AATCTACCAC GTAACAGCGA TACTATTACC CTTGAGAAAT CAGCTTGGGA TGTGCCTGCG
TCAATGAGTT TTGGTAACCA GCAAGTGGTG CCGATTAAAG CCAATGAGCA AATGCTTTGG
AAAGTGCTGT AG
 
Protein sequence
MTTTRTITRP DDWHLHLRDG EVLKDTVRDT SRYMGRAVIM PNLVPPVTNT ALALAYQARI 
FAAQPKAGFK PLMTLYLTDN TSADEIKKAK ASGQIYAAKL YPAGATTNSE SGVTSVEKIK
EALQAMQEVG MLLLIHGEVT ASDIDIFDRE EIFLQKVLAP IVASYPNLKI VLEHITTANA
VDFVNNAGDN VAATITAHHL MFNRNHMLVG GIRPHLYCLP ILKRNIHQQA LIKAATSGAK
KFFLGTDSAP HAVNRKEAAC GCAGCYTAHA AIELYAEVFE QAGALDKLEA FASFNGPDFY
NLPRNSDTIT LEKSAWDVPA SMSFGNQQVV PIKANEQMLW KVL