Gene Ping_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2289 
Symbol 
ID4626818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2782106 
End bp2783323 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content43% 
IMG OID639797430 
Productsaccharopine dehydrogenase 
Protein accessionYP_943629 
Protein GI119945949 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.772575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAT TACAGATAGG CGCCGGTGGC GTTGGTTGGG TTATTGCCCA TAAATGTGCC 
CTGCATAATG ATGTATTTGG CGATATCACC CTAGCTTCCC GCACTATTTC TAAATGTGAA
AAAATTATTA CCTCTATTAA AGGACGTAAT AATCTGAAAG ACACCACTAA AAAAATATCA
GCAGTGGCGG TTAATGCCGA TGATCTTAAT GCCCTGGTTA AACTTATTAA TGAAGTCAAA
CCCGATTTAC TGATCAATGC GGGCCCCCCT TGGGTGAACG TCAATATTAT GGAAGCCTGT
GTTTTAACTA AAACCGCTTA CCTTGATACC TCGGTTGCGA CAGATTTATG CAGTCCCGGA
CAACAAGTTC CTGAAGCTTA TGATCCGCAA TGGGCCTTTG CCGAACGTTT TAAAGAAGCC
GGTATTACGG GTATTTTAAG TACGGGTTGT GATCCGGGTG TAGTCAGTGT TTTTGCAACC
TATGCCCATA AGCACCTGTT TGATGAAATT GATAGTATTG ATGTGATGGA CGTTAATGCG
GGCGATCACG GTCAAAAATT TGCCACTAAC TTTGATCCTG AAACCAACTT ATTAGAAATT
CAAGGTGATT CTTTTTACTT TGAGAATCAG CAGTGGAAAA GTGTTCCCTG CCATAGTCGT
ATGATGGAAT TTGATTTCCC CGTGGTGGGT CCGCAAAAAG TGTACTCCAT GGCACATGAT
GAAGTACGTT CTTTGGCTGA ATATATTCCC GCTAAACGTA TCGAATTCTG GATGGGTTTC
TCCGATTCCT ACCTTAATTA TTTTAATATG CTGCGTGATC TTGGCCTGCT AAGCCCTAAG
CCCATTACCA CAGCTGAAGG CATTACGGTT AAACCCCTGC AGGTATTAAA AGCTATTTTA
CCCGATCCCA CTTCCCTTGC ATCCGGTTAT ACGGGTAAAA CCTGTATTGG CACCTGGATA
CGCGGTCAAA AAGATGGCCT GCCTAAAAGT GTCTTTATCT ACAATATTTG CGACCATAAA
GAATCTTATA TTGAAGTTGA ACATCAGGCA ATTTCCTATA CAACGGGTGT ACCTGCGATC
ACCGCCGCCC TGCTTTACTT TCAGGGTAAA TGGAATGATG TGGGTTTATT CAATGTAGAA
CAGCTCAACC CAGATGATTT CTTAGCGCTA ATGCCAAGTG TCGGTTTAAC CTGGCAGGTA
CAAGAGCTAG ACGCTTAA
 
Protein sequence
MSVLQIGAGG VGWVIAHKCA LHNDVFGDIT LASRTISKCE KIITSIKGRN NLKDTTKKIS 
AVAVNADDLN ALVKLINEVK PDLLINAGPP WVNVNIMEAC VLTKTAYLDT SVATDLCSPG
QQVPEAYDPQ WAFAERFKEA GITGILSTGC DPGVVSVFAT YAHKHLFDEI DSIDVMDVNA
GDHGQKFATN FDPETNLLEI QGDSFYFENQ QWKSVPCHSR MMEFDFPVVG PQKVYSMAHD
EVRSLAEYIP AKRIEFWMGF SDSYLNYFNM LRDLGLLSPK PITTAEGITV KPLQVLKAIL
PDPTSLASGY TGKTCIGTWI RGQKDGLPKS VFIYNICDHK ESYIEVEHQA ISYTTGVPAI
TAALLYFQGK WNDVGLFNVE QLNPDDFLAL MPSVGLTWQV QELDA