Gene Ping_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2284 
Symbol 
ID4626813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2775021 
End bp2776253 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content42% 
IMG OID639797425 
Productsugar ABC transporter extracellular solute-binding family 1 protein 
Protein accessionYP_943624 
Protein GI119945944 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.61221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGTT TAATTTTACT GGCAGCTCTT TTATGCGCTG TCAATGTTTA TGCGGCAGAA 
GTCGAGGTGC TTCACTGGTG GACAGCTAAG GGAGAAGTTG AAGCACAAGG CATACTTGAA
GATGCGTTGC TTGAGCAGAA TATAAAATGG AATAACTTTG CCATTGTGGG GGCAGGAGGT
GAAAGTGCTG TCCGTGTATT GCAAATGCGG GCACTGTCCG GGAATCCTCC CGATGTCGCC
CATATTAAAG GTCCGGATAT TGGTGAGTGG GCAAAAGTAG GCATGCTTGA AAATATTGGG
ACGATAGCAG ATACCAGCGT GTGGCCAGAG ATTCTCCCCA AGATCGTCCG TGAGACGGTG
ACCTTTGACG GGAAATATAT GGCTGTACCG ATTAATATTC ATCGTGTTAA TTGGTTGTGG
CTTAACAAAG CCATTTTTGA CGAGCTGAGT CTCCCTCTGC CGACAACATG GGAGGAGTTT
TTTGCCAATG CAGATAAAAT ACAGGCTGCA GGTTATATCG CCATTGCGCA TGGCGGGACT
GCCTGGCAGG ATGCGCTGTT ATTTGAATCG ATGGCACTGT CTTTATTAGG GGCCGAAAAG
TATAAACAGG CCTTTGTTGA GTATAATGAA GCGGTGTTAA CGTCACCAGA AATGATCTAT
GTATTTGAGC AGTTTAAACG TTTACATCAA TACACTGATA TTAATATGCG TGGTAAAGAT
TGGTATCAGG CAAGCCAGCT TATTAGCAAT AATAAGGCGG GCATGCAGTT TATGGGAGAC
TGGGCAATGG GGATGTGGAA TACCCAGGGA AAAAAAGCCA TGGTGGACTA TATCTGTATT
GATGTCCCTG AAAGTAAAGG ACTTTTTAGT TACAATATCG ACAGTTTTGT GTTTTTTGAA
AAAAACGGAA CAAAAAATTC GGGGGAAACA CAACGCAGCT TTGTCAATAT CTTGTTAAGC
GAAAAATTTC AAGCCGAATT TAATCTCGCA AAAGGTTCCA TTCCAGTTCG ACGTGGCATT
AATATGGATA AATTTAATCA ATGTGCACAT AAATCTTTTA CTGATTTTAA TAATGGGCAA
TTGGTCCCCT CTTTTACCCA AAATTTAGCC AGCACCAGTC ATTTGCAAAA TATTATAAGC
AAAATAATAA GCAATTATTT TAACAATCCC AGTGCCGATG CCGCCACTAC GGTAAACTCT
CTTTCATTGG CCATCAGAGC AATCAAGAAC TGA
 
Protein sequence
MKCLILLAAL LCAVNVYAAE VEVLHWWTAK GEVEAQGILE DALLEQNIKW NNFAIVGAGG 
ESAVRVLQMR ALSGNPPDVA HIKGPDIGEW AKVGMLENIG TIADTSVWPE ILPKIVRETV
TFDGKYMAVP INIHRVNWLW LNKAIFDELS LPLPTTWEEF FANADKIQAA GYIAIAHGGT
AWQDALLFES MALSLLGAEK YKQAFVEYNE AVLTSPEMIY VFEQFKRLHQ YTDINMRGKD
WYQASQLISN NKAGMQFMGD WAMGMWNTQG KKAMVDYICI DVPESKGLFS YNIDSFVFFE
KNGTKNSGET QRSFVNILLS EKFQAEFNLA KGSIPVRRGI NMDKFNQCAH KSFTDFNNGQ
LVPSFTQNLA STSHLQNIIS KIISNYFNNP SADAATTVNS LSLAIRAIKN