| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2279 |
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| Symbol | |
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| ID | 4626808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2767511 |
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| End bp | 2768455 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639797420 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_943619 |
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| Protein GI | 119945939 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATAA CACTTGCCCC GATGGAGGGC GTCATGGATC ACCAGATGCG CCAATTGTTA
ACGGCAATTG GTGGTTATGA TCTCTGCATT ACCGAATTTA TTCGCGTTGT TGATATGCAA
CTCCCGGCAA AAGTATACCG CCGTCATAGC CCGGAACTGT ATAACGACAG TAAAACTGCC
TCCGGCACCC CGGTACGCAT TCAATTATTA GGTCAAAACC CGCAATGTTT AGCAGAAAAT
GCGCATCAAG CCATCAGTAT CGGCTCCGAT GGTATTGATC TTAATTTTGG TTGCCCTGCA
AAAACGGTTA ATAAAAACAA AGGGGGCGCC GTGTTATTAA AATCACCGGA AGCCTTATAT
CAAATTGTGA CCGAGGTACG TAAAGCGGTG CCCGTATTTC AAACGCTCAG CGTCAAAATA
CGACTGGGTT ATGAGGATAA GTCTCTCGCA ATTGAAAACG CGCAGGCGAT CCAAGCCGCA
GGGGCCGATG AACTTGCGGT GCATGCCCGC ACGAAGGCAG AAGGTTACCG CCCGCCCGCC
CACTGGCATT GGATAGCTAA AATTAAAGAT GCGATCACTA TTCCCGTGAC AGCAAATGGT
GATATTTTCT CTGTTGATGA TGCCAAGCGT TGCATGGAAA TAACCGGTTG TGAGCGATTA
ATGATCGGCC GGGGTGCCCT GGCAACACCC AACTTAGCAC AAGCAATTAA AGGGATTGAA
TCTCCTAATA GCTGGCCAGA GATTTTGAAT ATACTGGAAA AATATATGTT TGTTCAAACT
CACGGCGATC AGGAAAAATA TTTACCCAGT CGCATTAAAC AATGGTTAAT ATTTATAAAA
GCGCAACATC CGCAGGCTGC TGTTTTCCTT CAGCAGGTGC GCACTATTAA AACAACCCAA
GAAATGTTGG CGGCGATCAA TCAAGAGCAG TTAAGGTTTA AATAA
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| Protein sequence | MQITLAPMEG VMDHQMRQLL TAIGGYDLCI TEFIRVVDMQ LPAKVYRRHS PELYNDSKTA
SGTPVRIQLL GQNPQCLAEN AHQAISIGSD GIDLNFGCPA KTVNKNKGGA VLLKSPEALY
QIVTEVRKAV PVFQTLSVKI RLGYEDKSLA IENAQAIQAA GADELAVHAR TKAEGYRPPA
HWHWIAKIKD AITIPVTANG DIFSVDDAKR CMEITGCERL MIGRGALATP NLAQAIKGIE
SPNSWPEILN ILEKYMFVQT HGDQEKYLPS RIKQWLIFIK AQHPQAAVFL QQVRTIKTTQ
EMLAAINQEQ LRFK
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