Gene Ping_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2257 
Symbol 
ID4627186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2743829 
End bp2745124 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content41% 
IMG OID639797397 
Productcitrate synthase I 
Protein accessionYP_943597 
Protein GI119945917 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.19804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.414999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC AAAAAGCAAT ACTTCAATTA CCTGGACAAG AAGCAATAGA ACTACCAATC 
ATGAAAGGGA CTGCCGGTAA TGATGTCATT GATATTCGAA GCTTAGGGAA AGCAGGTTAT
TTTACCTATG ACCCCGGTTT TCTAGCAACA GCTTCTTGTG AATCAGCAAT AACCTTCATA
GATGGCGACA AGGGAATCCT ATTACATCGC GGCTATGGAA TTGAAGAATT AGCTGAAAAA
TCTGACTACC TCGAAGTTTG TTATTTACTG TTAAATGGCC AATTTCCTGA CCAGGAACAG
TCAGAAAAAT TCCATCATGT TATATTACAC CATACAATGA TTCACGAACA GTTAGCAAAA
CTGTACCAAG GTTTCCGTCG CGATTCTCAT CCAATGGCAA TCATGTGTGG TGTTGTTGGC
GCATTATCAG CTTTCTACCA TGACTCTCTT GATGTTACCA ACGAAACTCA TCGTGAAATT
ACCGCTTACC GTCTAATTTC TAAAATGCCA ACCTTAGCGG CCATGTCCTA TAAATATTCA
AATGGTCAGC CCTTTGTTTA CCCTGACAAT AGCCTTTCAT ATGCAGGTAA TTTCCTGAAA
ATGATGTTTG CTGTTCCCTG CGAGGAGTTC AAAGTAAACC CCGTACTTGA ACGTGCGATG
GATAAAATAT TTATCCTGCA TGCAGACCAT GAACAAAATG CGTCTACTTC TACCGTCCGT
CTGGCTGGTT CATCGGGTGC TAACCCATTT GCGTGTATTG CCGCAGGTAT CGCATCTTTA
TGGGGTCCTG CACATGGTGG CGCCAATGAA GCTTGTTTGA ATATGTTAGA AGAAATCGGC
AGTGTTGAAA ACATTCCTGA ATATATCGAT AAAGCAAAAG ATAAAAATGA CCCATTCCGC
TTAATGGGCT TTGGACATCG GGTCTATAAA AATCACGATC CCCGTGCAAC TGTTATGCGA
AAAGCCTGTC ACGAAGTATT AGATGATCTG AACATTAATG ATCCTCTTCT TGACGTTGCT
ATGGAGCTTG AAAGAATTGC GCTTGAAGAC CCATATTTTG TAGAGAAAAA ACTCTACCCG
AATGTGGATT TTTATTCTGG TCTGGTACTG CGGGCAATGG GTATTCCTAA ATCAATGTTT
ACGGTTATTT TTGCGATTTC CCGTACTATT GGTTGGATAT CACATTGGAA AGAGATGTTA
GATCAACCTG GACTGAAAAT TGGACGACCA CGTCAGTTAT ATACTGGTGA AGTTGGACTA
AAAATTGATG ACGTTAAAAA TCGTTCTAAC ACATAG
 
Protein sequence
MSEQKAILQL PGQEAIELPI MKGTAGNDVI DIRSLGKAGY FTYDPGFLAT ASCESAITFI 
DGDKGILLHR GYGIEELAEK SDYLEVCYLL LNGQFPDQEQ SEKFHHVILH HTMIHEQLAK
LYQGFRRDSH PMAIMCGVVG ALSAFYHDSL DVTNETHREI TAYRLISKMP TLAAMSYKYS
NGQPFVYPDN SLSYAGNFLK MMFAVPCEEF KVNPVLERAM DKIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLNMLEEIG SVENIPEYID KAKDKNDPFR
LMGFGHRVYK NHDPRATVMR KACHEVLDDL NINDPLLDVA MELERIALED PYFVEKKLYP
NVDFYSGLVL RAMGIPKSMF TVIFAISRTI GWISHWKEML DQPGLKIGRP RQLYTGEVGL
KIDDVKNRSN T