| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2251 |
|---|
| Symbol | |
|---|
| ID | 4623461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2735542 |
|---|
| End bp | 2736741 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639797391 |
|---|
| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_943591 |
|---|
| Protein GI | 119945911 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.690195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAA TATTGGTTCC CGAGCTTCCA GAATCAGTTG CTGATGCAAG TGTTGCCATT
TGGCATAAGC AACCTGGTGA TTTTGTTGAG CGTGATGAAG TACTTGTTGA AATAGAAACC
GACAAAGTAG TGTTAGAAGT GCCAGCAACT GCCTCTGGTG TATTGGAAAG CATCATCGAA
AATGAAGGGG CAACCGTCCT TTCAAAGCAA TTGTTGGGTC AATTAAAAGA AGGTGCAGCA
GCGCCGGTAA AAGAGCAAAA AACTGAAACT GATGAAGCGC CTGCTGAATC TGCTACTGAC
ACCGCTGCTA CTGCTACTGA CACTGCAGAT GCAAGCCCAT CGGTGCGACG TTTAATTCTT
GAAAAAGGGT TAAATGCCGC CGATATCAAG GGAACAGGCA AAGGCGGTTC TATTACACGT
GAAGATGTAG AAAAACATCG AGTCACAAAA AATCAGGAAC AAACTGAACC AAAAGTTGAC
ATTGTTGCTG CGGTAGCTGC TCGCAGCGAT AAGCGCGTAC CAATGACACG TTTGCGTAAG
CGTGTTGCTG AGCGTTTATT AGAAGCAAAA AATTCTACTG CAATGTTAAC CACCTTTAAT
GAAGTTAACA TGAAACCGAT TATGGATCTT CGTCGCCAAT ATCAAGAAGT TTTTGAGAAG
AAACACGGTG TACGTTTAGG ATTTATGTCG TTTTATATTA AAGCTGTGAC AGAAGCACTG
AAACGATTCC CTGAAGTGAA TGCGGCTATT GATGGTGATG AAATTGTTTA TCATAATTTC
TTTGATATCA GTATTGCTGT TTCAACACCT CGCGGTTTAG TGACACCTGT TTTACGTGAT
GTGGATGATT TAAATTTTGC TGAAATCGAA AAGGGTATAA AAGTACTTGC GATTAAAGGC
CGTGATGGAA AATTAACCGT TGATGAAATG ATTGGTGGTA ACTTCACTAT TACAAACGGC
GGGGTATTTG GTTCTTTATT ATCAACGCCT ATTATTAACC CTCCACAAGC CGCCATCCTA
GGCATGCATA AAATTCAAGA TCGTCCTGTG GCAGTTGACG GTAAAGTGGA AATTTTACCG
ATGATGTATC TGGCACTTTC TTATGATCAC CGTTTAATCG ACGGGAAAGA ATCAGTTAGC
TTCTTAGTCG CAATCAAAGA ATTGCTTGAA GATCCAACGC GCTTATTATT GGATGTTTAA
|
|---|
| Protein sequence | MIEILVPELP ESVADASVAI WHKQPGDFVE RDEVLVEIET DKVVLEVPAT ASGVLESIIE
NEGATVLSKQ LLGQLKEGAA APVKEQKTET DEAPAESATD TAATATDTAD ASPSVRRLIL
EKGLNAADIK GTGKGGSITR EDVEKHRVTK NQEQTEPKVD IVAAVAARSD KRVPMTRLRK
RVAERLLEAK NSTAMLTTFN EVNMKPIMDL RRQYQEVFEK KHGVRLGFMS FYIKAVTEAL
KRFPEVNAAI DGDEIVYHNF FDISIAVSTP RGLVTPVLRD VDDLNFAEIE KGIKVLAIKG
RDGKLTVDEM IGGNFTITNG GVFGSLLSTP IINPPQAAIL GMHKIQDRPV AVDGKVEILP
MMYLALSYDH RLIDGKESVS FLVAIKELLE DPTRLLLDV
|
|---|
| |