Gene Ping_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2250 
Symbol 
ID4623460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2734243 
End bp2735409 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content42% 
IMG OID639797390 
Productsuccinyl-CoA synthetase, beta subunit 
Protein accessionYP_943590 
Protein GI119945910 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.655045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGC ATGAATATCA GGCAAAACAG TTGTTCAGAG AATATGGATT ACCTGTACCA 
CAAGGTATCG CATGCGATAC CGCTGAGGAA GCAGTAAGTG CAGCCTCTCA AATTGGTGGA
GACAAATGGG TTATCAAGTG TCAGGTACAT GCAGGTGGCC GTGGTAAAGC CGGTGGTGTT
GAGTTAGTTA GCACTAAAGA TGGTTTACGT GAGTTTGCAC ATAAATGGTT AGGTAAGAAC
TTAGTTACTT TCCAAACCGA TGCAAACGGT CAACCGGTTA ATAAGTTATT AGTAGAAAGC
TGTAGTGATA TTGCTAATGA GCTTTACTTA GGTGCGGTTA TTGACCGTGC TTCACAACGT
GTTACTTTTA TGGCATCGAC AGAAGGTGGT GTAGAAATTG AGAAAGTAGC AGAAGAGACG
CCTGAGCTTA TTCATACCGC AATGATTGAT CCATTAGTGG GCGCACAAGC GTACCAAGGT
CGTGAACTTG CCTTTAAATT AGGTCTTTCT GGTAAACAGA TTGGTCAATT TACAAAAATC
TTTCTGGGTC TTGCGACTCT TTTTGAAGAG AAAGATTTAT CGTTATTAGA AATCAATCCA
CTGGTTGTGA CTGCACAAGA CGATCTTATC TGTTTAGACG GTAAAATTTC TATCGATTCT
AACGCAATGT ACCGTCAAAA AGCGTTACAT GCGATAAACG ATACAACGCA AGATGATGAA
CGTGAAATGC ATGCTGCACA ATGGGAACTT AACTATGTTG CTCTTGATGG TAGCATCGGC
TGTATGGTAA ACGGTGCCGG CCTTGCAATG GGAACAATGG ATATCGTGCA TTTACACGGT
GGTAATCCGG CTAACTTCCT GGACGTAGGC GGCGGTGCAA CCAAAGAACG TGTTACCGAA
GCTTTCAAAA TCATTCTTTC TGACGATAAT GTTAAAGCTG TTTTAGTAAA CATCTTTGGC
GGTATTGTAC GTTGTGATTT AATTGCTGAC GGTGTCATTG GCGCAGTAGC TGAAGTTGGT
GTAACAGTGC CTGTTATCGT GCGTTTAGAA GGCAACAATG CTGATTTAGG TCGTAAAATT
CTTGCAGAAT CTGGTCTTAA TATTATCGCA GCTGCATCAT TAACAGATGC TGCTGAGCAA
GCGGTTAAAG CGGTAGGTGG CAAATAA
 
Protein sequence
MNLHEYQAKQ LFREYGLPVP QGIACDTAEE AVSAASQIGG DKWVIKCQVH AGGRGKAGGV 
ELVSTKDGLR EFAHKWLGKN LVTFQTDANG QPVNKLLVES CSDIANELYL GAVIDRASQR
VTFMASTEGG VEIEKVAEET PELIHTAMID PLVGAQAYQG RELAFKLGLS GKQIGQFTKI
FLGLATLFEE KDLSLLEINP LVVTAQDDLI CLDGKISIDS NAMYRQKALH AINDTTQDDE
REMHAAQWEL NYVALDGSIG CMVNGAGLAM GTMDIVHLHG GNPANFLDVG GGATKERVTE
AFKIILSDDN VKAVLVNIFG GIVRCDLIAD GVIGAVAEVG VTVPVIVRLE GNNADLGRKI
LAESGLNIIA AASLTDAAEQ AVKAVGGK