| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2240 |
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| Symbol | |
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| ID | 4623448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2722889 |
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| End bp | 2724757 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639797378 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_943580 |
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| Protein GI | 119945900 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.381879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTGG ATTTAAAAAA CTACCCATTG CTGACGAATA TTAATTATCC AGAGGATTTG
CGGTTATTAA AAAAAGAGCA ATTACCGGCT TTTTGTAATG AATTACGTTC ATTTCTTCTA
AATACTGTCA GTCAAACGAG CGGTCATTTA GCATCCGGTT TGGGTGTTGT TGAATTAACT
GTTGCTCTGC ATTATATTTA CCGCACGCCT TTTGATAACC TTATTTTCGA TGTTGGCCAT
CAAGCATACC CGCATAAAAT TTTAACGGGT CGGCGAGATA AAATGGGCAG TATTCGTAAC
TTTAAAGGCT TACATCCCTT TCCGTGGCGT GAAGAAAGTG AATATGATGT GTTAAGCGTT
GGTCACTCCT CGACATCAAT AGGGGCAGCA TTAGGCATGT CAATTGCTGC CGAAAAAGAA
CAACAAGGCC GCAAAGTAGT CGCTGTTATT GGTGATGGTG CCATTACCGC GGGCATGGCA
TTTGAAGCCT TAAATCACGC AGGTTCATTG CACAATGATA TGCTGGTGGT GTTAAATGAT
AATGAAATGT CAATTTCTGA AAATGTCGGG GCTTTAAATA ACCATTTAGC AAAAATACTC
TCCGGTGATA TTTATACTCA GCTTAGAGAA GGCAGTAAAA AAGTACTTTC TAATATCCCT
CCCGTTAAAG AGCTGGCCAA AAGAACGGAA GAACACCTTA AAGGAATGAT CTCACCTGCC
ACCATATTCG AAGAGTTTGG TTTTAACTAT ATCGGCCCGA TGGACGGTCA TAATGTTATC
GATTTAGTGG ATACGTTACG CAATATGCGC TCCCATAGCG GACCGCAGTT TTTACATGTA
ATGACGAAAA AAGGCAAAGG TTATAAACAG GCAGAGCTTG ATCCTATTAA GTACCATGCG
GTACCAAAAT TCACACCGGA TCAGGACCTT CCAAAATCAC CACCCAGCTC TGCTACTTTT
TCACAGGTAT TTGGAGATTG GTTAAATGAT ATGGCCGATC AGGATAATAA ACTGACGGCA
ATTACGCCAG CAATGCGCGA AGGCTCCGGT ATGGTGAGCT TTTCAAAACG ACATGCTGAC
AAGTATTACG ATGTGGCTAT TGCTGAACAG CATGCTGTCA CACTGGCGGC CGGCATGGCA
ATTGCTGGAT TAAACCCTGT TGTTGCTATT TACTCAACTT TTTTGCAACG TGCCTATGAC
CAACTTATCC ATGATATTGC TATCCAAAAT CTAGGGGTGT TATTTGCCAT AGACAGAGCC
GGTATTGTGG GTGCGGATGG TCCAACACAT CAAGGTGTGT TTGATTTAAG TTTTTTACGC
TGCGTTCCTA ATATGATTGT AATGACCCCG TCCGATGAAC AAGAGTGTCG GAATATGCTT
TATACGGGTC ATATGCTCAA TCAGCCTGCC GCGGTCAGAT ATCCACGCGG CACCGGAACC
GGTATCGAGA TAAACAAACA GATGAGCAGG TTAACTATTG GTAAAGCGAA GGTGGTAAAA
GAAGGTAAAA ATCTTGCCAT ATTATGTTTT GGTACCTTTT TACAACAAGC CTATTCCGTC
GCAGAAAAAT TGAATGCGAC CCTGGTTGAT ATGCGCTTTG TTAAACCGCT TGATAAAGAG
CTGCTTGATA ATCTCGCCAG CACCCACAAA GAGTTTGTCA CTATTGAGGA AAATAGTATT
GCCGGTGGCG CAGGCTCAGC AGTTAATGAA TATTTTATGT CTCAGCAAAT AAAGACAAGC
GTTTTAAATA TAGGCATACC CGACAGGTTT ATTGAACAGG GAACGCAGCA GGAAATATAT
ACATTACTTG AGCTCGATAG TGCTGGAATA GAGAAGCAAA TTGTCAGCTA CTATAGCCAT
CTCAAATAA
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| Protein sequence | MPLDLKNYPL LTNINYPEDL RLLKKEQLPA FCNELRSFLL NTVSQTSGHL ASGLGVVELT
VALHYIYRTP FDNLIFDVGH QAYPHKILTG RRDKMGSIRN FKGLHPFPWR EESEYDVLSV
GHSSTSIGAA LGMSIAAEKE QQGRKVVAVI GDGAITAGMA FEALNHAGSL HNDMLVVLND
NEMSISENVG ALNNHLAKIL SGDIYTQLRE GSKKVLSNIP PVKELAKRTE EHLKGMISPA
TIFEEFGFNY IGPMDGHNVI DLVDTLRNMR SHSGPQFLHV MTKKGKGYKQ AELDPIKYHA
VPKFTPDQDL PKSPPSSATF SQVFGDWLND MADQDNKLTA ITPAMREGSG MVSFSKRHAD
KYYDVAIAEQ HAVTLAAGMA IAGLNPVVAI YSTFLQRAYD QLIHDIAIQN LGVLFAIDRA
GIVGADGPTH QGVFDLSFLR CVPNMIVMTP SDEQECRNML YTGHMLNQPA AVRYPRGTGT
GIEINKQMSR LTIGKAKVVK EGKNLAILCF GTFLQQAYSV AEKLNATLVD MRFVKPLDKE
LLDNLASTHK EFVTIEENSI AGGAGSAVNE YFMSQQIKTS VLNIGIPDRF IEQGTQQEIY
TLLELDSAGI EKQIVSYYSH LK
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