Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2233 |
Symbol | rdgC |
ID | 4624411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2716495 |
End bp | 2717403 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797371 |
Product | recombination associated protein |
Protein accession | YP_943573 |
Protein GI | 119945893 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2974] DNA recombination-dependent growth factor C |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.725755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.304991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTTCA AAAACCTACA AGTTTATCGT TTTACCCGCC CCCTTGAACA AGACATTGAT ACATTAGAAA GAAATCTTGA AGAATTTAAA TTTAAACCCT GTGGCAGCCA GGATATTTCG AAACTAGGCT GGGTCTTCCC GATGGGAAAA TCAGGCTCAA TGTATACTCA CATTGCAGGC AAGCAAATTC TGATTTGCTT AAAAAAAGAG GAAAAGATGT TACCTGCAGG GGTCATTAAA GATCAACTGA ATGAACGCGT GGAAGCGATT GAACTTGAAC AGGGCCGCGC ACTGAAGAAA AAAGAAAAAG ACAGTCTAAA AGAAGAGATT GTCATGCAGT TGTTACCACG GGCATTTAGT CGTACTTCAC AAACCTTTGC CTGGATCGAT TCAGAATCAG ATATGTTATA TGTTGACGCA TCCAGTACCC GTAAGGCCGA GGAGCTTATT TCATTACTGC GTAAAACATT AGGCAGTTTG CCCATTGTCC CTATCCAGCT TAAAAACCAG GCAGATGTGA TTATGACCGA TTGGTTAACC GAGGGTAATA TCCCCGCTAA CTTTGCATTA GAAGATGAGG CCGAATTATG TTCGGCATTA GAAGGTGGCG GTATTATTCG CTGTAAACAG CAGGACTTAT TATCCGATGA AATAAAAAAC CATTTATCAG CTGATAAATT TGTGACTAAA TTAGCCCTGT GCTGGGCTGA CAGTATCTCA TTTATTATTG GCGAAGAATT TGCGCTTAAA CGCATTAAGT TTGCCGATGT ATTGCAGGAA CAAAATGAAG ATATCGATAA AGATGATTTT GCGGCTCGCT TCGATGCTGA CTTTGCCCTG ATGACGGGAG AAATTAAACA GCTCATTCCG GCTGTGCTAG CGGCTTTTGG TGGCGAGCAA AGCCTTTAA
|
Protein sequence | MFFKNLQVYR FTRPLEQDID TLERNLEEFK FKPCGSQDIS KLGWVFPMGK SGSMYTHIAG KQILICLKKE EKMLPAGVIK DQLNERVEAI ELEQGRALKK KEKDSLKEEI VMQLLPRAFS RTSQTFAWID SESDMLYVDA SSTRKAEELI SLLRKTLGSL PIVPIQLKNQ ADVIMTDWLT EGNIPANFAL EDEAELCSAL EGGGIIRCKQ QDLLSDEIKN HLSADKFVTK LALCWADSIS FIIGEEFALK RIKFADVLQE QNEDIDKDDF AARFDADFAL MTGEIKQLIP AVLAAFGGEQ SL
|
| |