Gene Ping_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2233 
SymbolrdgC 
ID4624411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2716495 
End bp2717403 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content41% 
IMG OID639797371 
Productrecombination associated protein 
Protein accessionYP_943573 
Protein GI119945893 
COG category[L] Replication, recombination and repair 
COG ID[COG2974] DNA recombination-dependent growth factor C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.725755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.304991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTCA AAAACCTACA AGTTTATCGT TTTACCCGCC CCCTTGAACA AGACATTGAT 
ACATTAGAAA GAAATCTTGA AGAATTTAAA TTTAAACCCT GTGGCAGCCA GGATATTTCG
AAACTAGGCT GGGTCTTCCC GATGGGAAAA TCAGGCTCAA TGTATACTCA CATTGCAGGC
AAGCAAATTC TGATTTGCTT AAAAAAAGAG GAAAAGATGT TACCTGCAGG GGTCATTAAA
GATCAACTGA ATGAACGCGT GGAAGCGATT GAACTTGAAC AGGGCCGCGC ACTGAAGAAA
AAAGAAAAAG ACAGTCTAAA AGAAGAGATT GTCATGCAGT TGTTACCACG GGCATTTAGT
CGTACTTCAC AAACCTTTGC CTGGATCGAT TCAGAATCAG ATATGTTATA TGTTGACGCA
TCCAGTACCC GTAAGGCCGA GGAGCTTATT TCATTACTGC GTAAAACATT AGGCAGTTTG
CCCATTGTCC CTATCCAGCT TAAAAACCAG GCAGATGTGA TTATGACCGA TTGGTTAACC
GAGGGTAATA TCCCCGCTAA CTTTGCATTA GAAGATGAGG CCGAATTATG TTCGGCATTA
GAAGGTGGCG GTATTATTCG CTGTAAACAG CAGGACTTAT TATCCGATGA AATAAAAAAC
CATTTATCAG CTGATAAATT TGTGACTAAA TTAGCCCTGT GCTGGGCTGA CAGTATCTCA
TTTATTATTG GCGAAGAATT TGCGCTTAAA CGCATTAAGT TTGCCGATGT ATTGCAGGAA
CAAAATGAAG ATATCGATAA AGATGATTTT GCGGCTCGCT TCGATGCTGA CTTTGCCCTG
ATGACGGGAG AAATTAAACA GCTCATTCCG GCTGTGCTAG CGGCTTTTGG TGGCGAGCAA
AGCCTTTAA
 
Protein sequence
MFFKNLQVYR FTRPLEQDID TLERNLEEFK FKPCGSQDIS KLGWVFPMGK SGSMYTHIAG 
KQILICLKKE EKMLPAGVIK DQLNERVEAI ELEQGRALKK KEKDSLKEEI VMQLLPRAFS
RTSQTFAWID SESDMLYVDA SSTRKAEELI SLLRKTLGSL PIVPIQLKNQ ADVIMTDWLT
EGNIPANFAL EDEAELCSAL EGGGIIRCKQ QDLLSDEIKN HLSADKFVTK LALCWADSIS
FIIGEEFALK RIKFADVLQE QNEDIDKDDF AARFDADFAL MTGEIKQLIP AVLAAFGGEQ
SL