Gene Ping_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2228 
Symbol 
ID4624406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2711379 
End bp2711918 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content40% 
IMG OID639797366 
ProductYaeQ family protein 
Protein accessionYP_943568 
Protein GI119945888 
COG category[S] Function unknown 
COG ID[COG4681] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.297124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.623487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA AACCGACAAT TTTTAAAATG AACATCAATC TATCGGATCT TAATAATGAT 
CGTTATGACA CCCTTAATCT AACCGTTGCC CAGCATCCTT CAGAAACACA AGAACGTATG
ATGGCGCGTG TGATGGCTTA TTGTCTTAAT GCACAAGAGT TTTTAAGCTT TACCAAAGGG
CTGTCGGTTG CGGATGATCC GGATATCTGG GCAAAAAGCT TAGATGATCA ACTTTTATTA
TGGATTGATC TCGGTGAGCC GGCTTTTGAA CGAATTAAAA AAGCGTCACG TTTAGCCAAA
GCTGTTAAGG TTTATAGTTT TAACAGCAAA TCAGCGGTCT GGTGGAAACA ATCCTTAACG
GATTTTGGGA AACTTAATAA TGTCGAGGTT TATCAGTTTA ATTTTGAACA GATAAAGGCT
TTAGCGAAGT TGGTCAAACG TACCATGGAT TATTCGGTCA CTATTGCGGG AGACACGCTC
TATATAGCGA CTGAGCTGGG CGAGTGTGAA ATCAGCTGTA ACGCGTTACA AGTTAAATAA
 
Protein sequence
MALKPTIFKM NINLSDLNND RYDTLNLTVA QHPSETQERM MARVMAYCLN AQEFLSFTKG 
LSVADDPDIW AKSLDDQLLL WIDLGEPAFE RIKKASRLAK AVKVYSFNSK SAVWWKQSLT
DFGKLNNVEV YQFNFEQIKA LAKLVKRTMD YSVTIAGDTL YIATELGECE ISCNALQVK