Gene Ping_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2213 
Symbol 
ID4623850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2696342 
End bp2696674 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content33% 
IMG OID639797351 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_943553 
Protein GI119945873 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00866418 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.209417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TTATTTCTGA AGCACATGCA GCAGGTGAAG GTCAAGCAAC AGACAGTATG 
TCTTTTGTTT TGATGATGGT TGTTTTCGCT GCAATATTTT ATTTTATGAT TTACCGTCCT
CAGGCAAAGC GTACTAAAGC GCATAAAAGC CTAATGGAAA GTATCGGTAA AGGTGATGAA
GTCTTAACCC AAGGTGGTTT AATTGGGCGT GTTGTTAAAG TTAATACTGA AAATGATTAT
CTTCAAATTG AATTAAATGA AAATAATATC ATTTCAATTA AAAAAGATTA TGTAACCGCT
ATTTTACCAA AAGGCACGCT TAAATCTATC TAA
 
Protein sequence
MSLFISEAHA AGEGQATDSM SFVLMMVVFA AIFYFMIYRP QAKRTKAHKS LMESIGKGDE 
VLTQGGLIGR VVKVNTENDY LQIELNENNI ISIKKDYVTA ILPKGTLKSI