| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2211 |
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| Symbol | secF |
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| ID | 4623848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2693427 |
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| End bp | 2694371 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639797349 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_943551 |
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| Protein GI | 119945871 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.433949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.220964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGAGT TAATTAAATC GAAAAAAACG CTGCCTTTTA TGCAATATTC GAAACCGGCA
TCTTGGTTTT CAATGTTCTT AATTGTCGCT TCAGTTGCCG CGTTAAGTAT TAACTGGTTA
AACTGGGGCC TTGATTTTAC CGGTGGGACT GTTATTGAAG TTGGTTTTGA GCAACCTGCT
GTATTACCCG ATGTGCGTGA TGTATTAGCA TCGAATGATT TCTCCGATGC AGTTGTTCAG
CATTTCGGCA CTAGCCGTGA TGTTATGATC CGCTTAGCAC CTCGAGAAGG CGTTCGAGGA
GAAGTTATCG GGACTCAGGT GCTAGAGTCA TTACAGAATG CCGATTTCGG ACAAGTGGAT
ATGCGCCGGA TTGAATTTGT TGGGCCTAAT GTGGGGGCTG AATTAGCAAA TTCCGGTGGT
TTAGCTATTA TTATTGCGCT TATCTGTATT TTAATTTATG TCAGTATTCG CTTTGAATGG
CGCTTGGCGT GCGGCTCTGT GTTAGCTTTA GCACACGATA TTATTATAAC ACTCGGATTT
TTCTCATTAT TTAAAATTGA AGTGGATTTA ACCGTATTAG CCGCTTTATT GGCTGTTGTT
GGTTATTCTC TCAACGATAC TATTGTAGTA TTTGACCGAA TACGTGAAAA TTTCCGCTTA
CTGACAACGG CAACTTCAAA TGATATTGTC GATAAATCGC TTACACAGAC CTTAAGCCGT
ACCTTAATTA CCTCAGGAAC CACTATTTTT GTATTGATTT CACTGTTTAT TTTTGGCGGT
GCATTGATCC ATGGTTTTGC AACGGCATTA TTGATTGGTG TTATCGTGGG TACTTACTCC
TCCATTTATG TGGCCAGTGC ACTGGCAATT AAATTAGGTA TTTCCCGTGA GCATATGATT
CCAGAAGTTG TTGAAAAAGA GGGGGCAGAT CAAGACCCCT TATAG
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| Protein sequence | MFELIKSKKT LPFMQYSKPA SWFSMFLIVA SVAALSINWL NWGLDFTGGT VIEVGFEQPA
VLPDVRDVLA SNDFSDAVVQ HFGTSRDVMI RLAPREGVRG EVIGTQVLES LQNADFGQVD
MRRIEFVGPN VGAELANSGG LAIIIALICI LIYVSIRFEW RLACGSVLAL AHDIIITLGF
FSLFKIEVDL TVLAALLAVV GYSLNDTIVV FDRIRENFRL LTTATSNDIV DKSLTQTLSR
TLITSGTTIF VLISLFIFGG ALIHGFATAL LIGVIVGTYS SIYVASALAI KLGISREHMI
PEVVEKEGAD QDPL
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