| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2208 |
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| Symbol | |
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| ID | 4623845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2688014 |
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| End bp | 2691211 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639797346 |
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| Product | ribonuclease, Rne/Rng family protein |
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| Protein accession | YP_943548 |
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| Protein GI | 119945868 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.162702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA TGTTAATCAA TGCGACTCAA GCAGAAGAAT TGCGTGTTGC ACTCGTAGAT
GGTCAGATGT TGTATGACCT AGATATTGAA AGCCCTGGTC ATGAACAAAA AAAAGCAAAT
ATTTACAAAG GTAAAATCAC TCGTGTAGAG CCCAGCTTAG AAGCTGCGTT TGTAGAATAT
GGTGCTGAAC GACATGGTTT CCTTCCTCTA AAAGAGATTG CCCGCACATA CTTCCCTGAA
GGTTATTCTT TTAAAGGACG TCCGAATATT AAAGACGTCA TAAAAGAGGG TCAGGAAGTC
ATTATCCAAA TTGAGAAAGA AGAACGCGGT AATAAAGGTG CGGCATTAAC CACCTTTATC
AGTTTAGCCG GTAGTTACTT AGTATTAATG CCAAACAATC CTCGTGCAGG CGGTATTTCA
CGTCGCATCG AAGGCGATGA ACGAACTGAA CTCAAAGAAG CGCTTAGCCA CCTTAAACTA
CCCAACGGCA TGGGACTTAT CGTACGCACA GCCGGGGTAG GTAAAACGCC GGAAGAGTTG
GAATGGGATT TAAATGTATT AGTTAATCAT TGGCAAGCCA TTGACGAAGC TGCCCGTGCT
CAACCTGCTC CTTTTCTAAT TCATAGAGAA AGCAATGTTA TCGTACGCTC TATTCGTGAT
TATCTGCGCC GTGATATAGG TGAGATTGTT ATTGATCATG CAAAAACCTT TGAACTGGCT
AAAAATCACA TCGCGATGGT GCGTCCTGAC TATGTTAGCC GCTTAAAATT ATACCAGGGT
GAAGTGCCAT TATTCACTCA TTATCAGGTA GAAAGTCAAA TAGAATCGGC TTTCCAGCGT
GAAGTCCGTT TACCTTCCGG TGGTTCAATT GTTATTGATC CCACTGAGGC CTTAACCTCT
ATTGATATTA ACTCTGCACG TGCTACACGT GGTAGTGATA TTGAAGAAAC TGCTTTTAAT
ACAAATCTGG AAGCGGCAGA AGAGATAGCC CGACAATTAC GCCTGCGTGA CTTGGGCGGT
TTAGTTGTTA TCGACTTTAT CGATATGACA CCGCCTCGCC ATCAGCGTGA AGTTGAAAAC
CGTATGCGTG AATCCGTTCG TCAGGATAGA GCCCGCATTC AATTAGGTCG TATTTCTCGT
TTTGGTCTGA TGGAAATGTC CCGTCAACGT CTTCGGCCTT CTCTTGGTGA ATCTGCATCT
CGTGTCTGCC CTCGCTGCCA TGGTCAAGGT ACCATCCGTG ATAATGAATC GCTTGCATTA
GCTATTTTAC GACTAATAGA GGAGGAAGGC TTAAAAGAGA ATACGGTACA AATTCAAGCG
ACTGTTCCGG TTGCCGTTGC CGCTTACTTA TTAAATGAAA AACGTAAAGA TGTGCAAAAA
ATAGAAAAAC GTCATTCTTG CGAAGTTTAT ATCATTCCCA ATGCGAACCT GTTAACACCG
CATTTTGAAA TTAAACGTAC CCGTAAAGAT GGCAAAGAAG ATATCAATTA CGATGCCCTT
GAAAAACAAC ATACGGTTTA TGTGCCTAAT GTCATCAAAG ATGAGCATAA CAATGAAGCC
GATCCTGTAT TGTCTGGTTT TTCAAGTCCT AAACAAAAAA CCACAGAAGA AAAAACAGTA
AAGAAAGAGA TAATTCCGGA GCCTAAAACA GTAGAAGCGG CAAAACCTTC TCTCTTTTCA
AAAATAATCT CGGCGATATC TTCTCTATTC AATGATAGCG AAAAACAACT GCCTGTTGAG
GAAAAAGAAG CACCGCCCGT TGCAGAGCCA GTCACTAATA ACCGCAATAA CCGCAACAAC
AGTCGCAATC GGAACCGTAA TCAAAATCGC GCCGAGAAAA GTCGTACTAC GCAAGCACCT
ACTGAAGCTA AAGCGACTCC CAACAAAGAG TCTGAACGCC CTAAAAAGCA AGAAACGTCA
GTTCAACCTC CTGCAAATGA AGATGCAGTT GCCGTTCGCC GTAAACGTAG AAATATGCGC
AAAAAAGTAC GTATTCAAAA TACGCGTGAA ACAGACTCGT CCAGTGTAGA AGCGCCAGCT
GTTAATGAGC TGGATAATAA ACCCGCTGTT AATACGCCTA AAGTTAAAAA ACCGGCAGCA
CCGAAAAGCA AACCGGTAAA AGCAGAAACA GCTGACACGG AACTAGCGGT AGAGGGTAAT
ACAGCCCCAA CAGCAGATAA AATTGAAACT GAAGAACATA AAGCAGTTGC AATTCCAAGT
CGTCGTTCAC GTTATCTGCG CAATAATGCC CAACGAAATA AAAAGAATAT GACGCCTGAA
AGTGATCAGG AAGAATATAA CTTACCAACA GATCAGCAAG ATCCGATAAG TAGTCGCTAC
CCAGAATCTG AAACTGTTGA TAGTGAAGCT AAATTTGAGC CTGTCGCAGA TCAAGCAATG
GCCGAAATGG TAAGCAATGC TGAGCAGCAA GCTTCTATTG CACCAGAAAT TGAAACGATT
AAAAACACAT CGACTACACA AGAATCTGTT GAGCAGATTC AAAAAAGCGT TAATGCAGCA
ATTCAAGAAG CTCAGCAAAT TTCGTCTGCG GCCGAAACTG CTAAGGTTAT TGAAAAAGCT
GAAGTTAAAG AAACCCCTAA CGTTAAAGAA ACCGCTCCGG TTGAAGAAAC CGCTGCAGTT
AAAGAAACCG CTGCAGTTAA AGAAACCGCC GCAGTTGAAG AAACCGCCGC AGTTAAAGAA
ACCGCCGCAG TTGAAGAAAC CGCCGCAGTT GAAGAAACCG CCGCAGTTAA AGAAACCGCC
GCAGTTAAAG AAACTGCTCC AGTTAAAGAA ACTGCTCCAG TTAAAGAAAC TGCTCCAGTT
AAAGAAACTG CTCCAGTTAA AGAAACTGCT CCAGTTAAAG AAACTGCTCC AGTTAAAGAA
ACTGCTGCAG TTGAAGAAAC TGCTCCAGTT GAAGAAACTG CTTCAGTTAA AGAAACTGCT
GAAGTTAAAG AAACTGAGCT TGCAGGTGCC ACTATTAATG AAAAATCAAT TAATAAAAAC
CAAGGAATAA TCAGTAATCT TAAAAAATCT TCAGCATCTC CAATGACTAA AACAGTCAGT
GGACCACTTG ATACAAATGC TAACATAATG ATTGTTGCCG CAACACAGCG ACTAACAGTC
ACTAAATCAG GGCGCCCGGC TGGTAGCCGT TTTGCTACCA GTAGTGCGAG CAGTGAAACA
GTTAAGGCAA AATTATAA
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| Protein sequence | MKRMLINATQ AEELRVALVD GQMLYDLDIE SPGHEQKKAN IYKGKITRVE PSLEAAFVEY
GAERHGFLPL KEIARTYFPE GYSFKGRPNI KDVIKEGQEV IIQIEKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDERTE LKEALSHLKL PNGMGLIVRT AGVGKTPEEL
EWDLNVLVNH WQAIDEAARA QPAPFLIHRE SNVIVRSIRD YLRRDIGEIV IDHAKTFELA
KNHIAMVRPD YVSRLKLYQG EVPLFTHYQV ESQIESAFQR EVRLPSGGSI VIDPTEALTS
IDINSARATR GSDIEETAFN TNLEAAEEIA RQLRLRDLGG LVVIDFIDMT PPRHQREVEN
RMRESVRQDR ARIQLGRISR FGLMEMSRQR LRPSLGESAS RVCPRCHGQG TIRDNESLAL
AILRLIEEEG LKENTVQIQA TVPVAVAAYL LNEKRKDVQK IEKRHSCEVY IIPNANLLTP
HFEIKRTRKD GKEDINYDAL EKQHTVYVPN VIKDEHNNEA DPVLSGFSSP KQKTTEEKTV
KKEIIPEPKT VEAAKPSLFS KIISAISSLF NDSEKQLPVE EKEAPPVAEP VTNNRNNRNN
SRNRNRNQNR AEKSRTTQAP TEAKATPNKE SERPKKQETS VQPPANEDAV AVRRKRRNMR
KKVRIQNTRE TDSSSVEAPA VNELDNKPAV NTPKVKKPAA PKSKPVKAET ADTELAVEGN
TAPTADKIET EEHKAVAIPS RRSRYLRNNA QRNKKNMTPE SDQEEYNLPT DQQDPISSRY
PESETVDSEA KFEPVADQAM AEMVSNAEQQ ASIAPEIETI KNTSTTQESV EQIQKSVNAA
IQEAQQISSA AETAKVIEKA EVKETPNVKE TAPVEETAAV KETAAVKETA AVEETAAVKE
TAAVEETAAV EETAAVKETA AVKETAPVKE TAPVKETAPV KETAPVKETA PVKETAPVKE
TAAVEETAPV EETASVKETA EVKETELAGA TINEKSINKN QGIISNLKKS SASPMTKTVS
GPLDTNANIM IVAATQRLTV TKSGRPAGSR FATSSASSET VKAKL
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