| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2197 |
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| Symbol | |
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| ID | 4625231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2672598 |
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| End bp | 2674469 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639797335 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_943537 |
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| Protein GI | 119945857 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.482206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.318033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATT ATAAAAAAAC GATGTGGGTA AATTATTTAT TTACATTTTT ATCAGCAGTG
GCGATCACTT TGGTTATAAA AGTTGTTTTC AACCCGCTTC TTACTGAGCA ACAAGAACAG
CTTGTACAAG AGCTAAGTTT AGATAGCCCC CACCTGTTCG TGAATGAATC AGAATTAAGC
CGATTAGTTG AACACAATCA ATTTTCCTAT ATTAAAATAA CTAACCCTCA GTTGATGCTG
CCATTGGTCT ATGAAAACAA ACAAGCAACT GGAATTATAA GATTATTATT TTCTATCCCT
TCAACTTTTG TTGTCTCCGA AAATAGCAAT CAGATAATTG AATTTAAGTC TAACAATGAT
GCTCTATTCG GACTATTGCC TAATATTCTT TTAGCCCTGT ATAGCGCATT AATCATTGTG
TCGACATTTA TAGTCTTTAA TTTTTCTCAT ATGTTTAAAA GTATTGAAAT AGCCCTCATT
AACGAAATAT CTGAGATAGA AGCACTACCT GGTCCCTATG CTAAGGTTTC TGCATTATTA
AATGCTCAAA AAGAATCATT CCAAAACAAA TTAAATAAAC AGGAAGAAAA AATCGCAGGA
TTGACGCAGC AGGCGACGAC CGACAATCTC ACTGGCGTTA ATAACAGAAG TTCATTCCGC
AAAACCTTAA CCGAAATTTT AAGTGCTGAA AGCGGACAAA AACATGCCAT CTTATCGATT
ATCAGAGCAA GTGAATTACT GGCAATAAAC TCTCAGCAGG GCTTCATGCA GGGTGATTTA
TACCTTGAAA ATCTCACTGA AATTATCCGT AAAGTCACTT ATCCCCATAA AAACATATCG
ATTTACCGCA TCAGCGGTTC CGATTTTGCG TTAATCGCAC TGGGAATGAG CGTCAGTGAA
GCGCAACGAA TTGCACAGGA CTTAAAGGTT CTATTTGATC AGTATCAAGC TCAACATAAA
CTAGACAGTA TTGCCTACAA TGGCATATCA TCATTCCAGT CTGGACAGAA GCCCGAACAA
GTATTGGCAC GAACTGATTT AGCATTGGCA AAAGCACAAA CAGAAGGCGT TAATAGCTGG
GTATTTCAAC AAAGTAATGA TAATGATAAT CAATTTGGAC AGCAGCAGTG GCGTGTCGTG
ATCGAAAATA TTATCGCCAA AAAAAGTGTC ATATTATTAC ACCAACCTGT TCTAATACTT
CCAACTGATA TGGTCGGCTA TGAGGAAATT TTCACCCGCT TTGTATCCGA TGATGGTCAT
GTCACACCCG CTGAGACTGT TTTTGCAATG GCTCAACGTG TTGATATGAT AATTAAACTT
GAGCAATTCA TTATTGGAGA AGTCATAAAT CAATGCCGCA GGAAAAGCGA CCAGAAGAGT
CGTTGGGGGA TCAATATAAG CAGCTCTGCC ATGCAAAACA GTAGCTTTAT CGTGTGGTTA
GAAAGATTAT TATTACGAGA TCCGAAAGTA GCTGCATTAC TCACTTTTGA AATGCAGGAA
GAGTTACTTG ATAGTAACCT TGTTTCAAGT AAACGGGTTT TTGATATGCT CAGACGCACT
GGGACACGAT CTGCAATTAG TAACTTTGGT AAAGGGATTG GTTCATTTGG CCTACTTAGG
ACGCTTAAAC CTGATTTGGT TAAAATTGAT TCAAGTTTGA TCAATAATAT TGAGCTTGAC
AGTGCGAATC AACAATTTAT AAGGATGATT ATCGATGTTG CACACCGAAT GGATTGTACT
ATTATCGCCG AAGGTGTCGA GCATTTAGCG CAAAAGCAGA TATTAGAAAC GATGCATATA
GATGGTATTC AAGGCTTCTT AATCGCACGC CCTACTGAAC TAAAGATCCC GGGCCAAGTG
AACTTACTAT AG
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| Protein sequence | MNNYKKTMWV NYLFTFLSAV AITLVIKVVF NPLLTEQQEQ LVQELSLDSP HLFVNESELS
RLVEHNQFSY IKITNPQLML PLVYENKQAT GIIRLLFSIP STFVVSENSN QIIEFKSNND
ALFGLLPNIL LALYSALIIV STFIVFNFSH MFKSIEIALI NEISEIEALP GPYAKVSALL
NAQKESFQNK LNKQEEKIAG LTQQATTDNL TGVNNRSSFR KTLTEILSAE SGQKHAILSI
IRASELLAIN SQQGFMQGDL YLENLTEIIR KVTYPHKNIS IYRISGSDFA LIALGMSVSE
AQRIAQDLKV LFDQYQAQHK LDSIAYNGIS SFQSGQKPEQ VLARTDLALA KAQTEGVNSW
VFQQSNDNDN QFGQQQWRVV IENIIAKKSV ILLHQPVLIL PTDMVGYEEI FTRFVSDDGH
VTPAETVFAM AQRVDMIIKL EQFIIGEVIN QCRRKSDQKS RWGINISSSA MQNSSFIVWL
ERLLLRDPKV AALLTFEMQE ELLDSNLVSS KRVFDMLRRT GTRSAISNFG KGIGSFGLLR
TLKPDLVKID SSLINNIELD SANQQFIRMI IDVAHRMDCT IIAEGVEHLA QKQILETMHI
DGIQGFLIAR PTELKIPGQV NLL
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