Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2196 |
Symbol | |
ID | 4625666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2671534 |
End bp | 2672313 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639797334 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_943536 |
Protein GI | 119945856 |
COG category | [V] Defense mechanisms |
COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.936196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.546259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCTC TTCTTTGCAT AGATAATTTA TATAAACAAT ATAAAGGCAG TAAGTTTTTT TTGTCTTCGG GCTTTCGAAA TTCGGTAGGA CCAATAAATT TCACCCTTGA GCAGGGTAAA ATTTTGACTA TTATTGGTGA AAATGGCTCA GGAAAAAGCA CGCTGGTACA GATGATCGCA GGCGTTATTC CAAGTACTTC CGGTGAGATT TATATTAAGG GTCATGCTCT TACGACTATG TCACGACAGA ATAGATGTAA ATCAGTTCGT ATGATATTTC AAGATCCAAA AATTTCCCTC AACCCTAAAG TGACTATTGG GAAAATATTA TCTGCCCCAC TAGAGTTAAA CACTGATTTA ACGGCAGTAC AACGCAAGCA ACAGATCATC GCCACATTAG AGTTGGTTGG TTTATTACCG GATTATCTGC AATTCTATCC AAATATGTTA TCAGCGGTTC AACAACATCA AGTTGCCATA GCACGGGCGA TGGTCTTAAA TCCTGATGTC GTTATCGCAG ATTCAATTTT ATCAACGTTA GATATCTCTC TCGGTTTCAA AATAGTTAAT ATTTTATTAG AGATACAAGA AAAAAAAGGG GTTAGTTTTA TATTTATTTC GCATCATATG AACTTGGTAC GTCATATCAG CGATCAAGTT ATTGTTATGC AACAGGGCAA GATCGTTGAG AACAATACAA CAGATAATAT ATTCAATTCA CCTCAAAAGA TGAGCACAAA AAATTTACTA AAAAGTCAAC AGCCAGACTA CAGGAAATGA
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Protein sequence | MTALLCIDNL YKQYKGSKFF LSSGFRNSVG PINFTLEQGK ILTIIGENGS GKSTLVQMIA GVIPSTSGEI YIKGHALTTM SRQNRCKSVR MIFQDPKISL NPKVTIGKIL SAPLELNTDL TAVQRKQQII ATLELVGLLP DYLQFYPNML SAVQQHQVAI ARAMVLNPDV VIADSILSTL DISLGFKIVN ILLEIQEKKG VSFIFISHHM NLVRHISDQV IVMQQGKIVE NNTTDNIFNS PQKMSTKNLL KSQQPDYRK
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