Gene Ping_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2196 
Symbol 
ID4625666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2671534 
End bp2672313 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content36% 
IMG OID639797334 
ProductABC transporter ATP-binding protein 
Protein accessionYP_943536 
Protein GI119945856 
COG category[V] Defense mechanisms 
COG ID[COG4167] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.936196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.546259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTC TTCTTTGCAT AGATAATTTA TATAAACAAT ATAAAGGCAG TAAGTTTTTT 
TTGTCTTCGG GCTTTCGAAA TTCGGTAGGA CCAATAAATT TCACCCTTGA GCAGGGTAAA
ATTTTGACTA TTATTGGTGA AAATGGCTCA GGAAAAAGCA CGCTGGTACA GATGATCGCA
GGCGTTATTC CAAGTACTTC CGGTGAGATT TATATTAAGG GTCATGCTCT TACGACTATG
TCACGACAGA ATAGATGTAA ATCAGTTCGT ATGATATTTC AAGATCCAAA AATTTCCCTC
AACCCTAAAG TGACTATTGG GAAAATATTA TCTGCCCCAC TAGAGTTAAA CACTGATTTA
ACGGCAGTAC AACGCAAGCA ACAGATCATC GCCACATTAG AGTTGGTTGG TTTATTACCG
GATTATCTGC AATTCTATCC AAATATGTTA TCAGCGGTTC AACAACATCA AGTTGCCATA
GCACGGGCGA TGGTCTTAAA TCCTGATGTC GTTATCGCAG ATTCAATTTT ATCAACGTTA
GATATCTCTC TCGGTTTCAA AATAGTTAAT ATTTTATTAG AGATACAAGA AAAAAAAGGG
GTTAGTTTTA TATTTATTTC GCATCATATG AACTTGGTAC GTCATATCAG CGATCAAGTT
ATTGTTATGC AACAGGGCAA GATCGTTGAG AACAATACAA CAGATAATAT ATTCAATTCA
CCTCAAAAGA TGAGCACAAA AAATTTACTA AAAAGTCAAC AGCCAGACTA CAGGAAATGA
 
Protein sequence
MTALLCIDNL YKQYKGSKFF LSSGFRNSVG PINFTLEQGK ILTIIGENGS GKSTLVQMIA 
GVIPSTSGEI YIKGHALTTM SRQNRCKSVR MIFQDPKISL NPKVTIGKIL SAPLELNTDL
TAVQRKQQII ATLELVGLLP DYLQFYPNML SAVQQHQVAI ARAMVLNPDV VIADSILSTL
DISLGFKIVN ILLEIQEKKG VSFIFISHHM NLVRHISDQV IVMQQGKIVE NNTTDNIFNS
PQKMSTKNLL KSQQPDYRK