| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2194 |
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| Symbol | sapC |
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| ID | 4625664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2669637 |
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| End bp | 2670527 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639797332 |
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| Product | peptide ABC transporter, protein inner membrane binding component SapC |
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| Protein accession | YP_943534 |
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| Protein GI | 119945854 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.381606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.512375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGATAA ATAACGAATT TAACGAGCAA AAAATACAAT CCCCATTGCA TTATATTTGG
TCTATTTTCC TCAAAAACAA TTTCGCGGTT TTTGCCATGT GGGTCGGTAT TGTGCTTATC
CTGATTTGCT TATTTGCTGA TGTTATTGTG CTTTACTCCC CTTTTTCACA AGATCCAGAG
CACTTATTAT CAGCTCCTTA TTGGGTTGAA GGTGGGACGA CTGAGCATCT GTTTGGCACC
GATGATTTAG GAAGGGATAC GCTAGCGCGT TTAATTAAAG GTTTTCAATT CACCTTCGGT
GGCGCATTAC TTATCACCTG TGCAATCACT TTTATTGGTG CCATTATCGG CTCTACAGCG
GCCTTAACCA AAGGTCTTAA AGCAAGTGTT TTACATCATC TTTTAGATGC ACTTTTAACT
ATTCCGACAT TACTTATCGC GTTTATTTTA ATTGTGTTGT TCGACCCAAG TTATCAAAAC
GCCTTAATAG CAGTCTCCCT TTCACTCTTA CCACAGTTTA TACGGGGTAT CTACAACACC
ATCGACAGCC AATTGAACAA ACAATATGTC GTTGCCCTTC AACTTGATGG GGCAACCAAT
ATACGCCTAC TGCGGTTTGG TATATATCCA AATATCCTAG AGCCAATAGT AACGCTGATC
AATAGGATTT TCACTATGGC GATATTAGAA ATAGCAACGC TAGGTTTCTT AGGGTTTGGC
ACCCAATCAC CTGACATTGA GTTGGGTAAG CTAATCGCCG ACAGCATTGA TCTTTCTTAT
TTATCCCCCT GGCTTATTAT ACTGCCAGGT CTGCTGATTT TTATTATCAT CATGGTTGTT
AATATATTTA CGGAAGGTTT ACGTCATGCA ATTATACAAG GGGAAGATTG A
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| Protein sequence | MLINNEFNEQ KIQSPLHYIW SIFLKNNFAV FAMWVGIVLI LICLFADVIV LYSPFSQDPE
HLLSAPYWVE GGTTEHLFGT DDLGRDTLAR LIKGFQFTFG GALLITCAIT FIGAIIGSTA
ALTKGLKASV LHHLLDALLT IPTLLIAFIL IVLFDPSYQN ALIAVSLSLL PQFIRGIYNT
IDSQLNKQYV VALQLDGATN IRLLRFGIYP NILEPIVTLI NRIFTMAILE IATLGFLGFG
TQSPDIELGK LIADSIDLSY LSPWLIILPG LLIFIIIMVV NIFTEGLRHA IIQGED
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