| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2191 |
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| Symbol | |
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| ID | 4625661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2665511 |
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| End bp | 2666839 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639797329 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_943531 |
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| Protein GI | 119945851 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.114435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.562583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACAAG CAAAATTTCT GCAAGGATCT ATTTTAAAAC ATGTTATAAC CATGTCTGCG
ACTAATGCTA TCGGCATTAG TGCGTTGTTT ATGGTCGATT TAGTGGATAT CTATTTTATC
AGTTTATTAG ATAATCCAGC CCTCGTTGCT GCAATAGGCT ATGCGGCTGC AATATTGTTT
TTTACCACTT CAATCAGTAT TGGTTTAGTA ACGGCAAACA GTGCCAAAGT GGCCAAAGCC
ATTGGCCAGA AAAACCGCCA GAAAGCTTGC CGGTATATTT CCCACATCAC TTTGTATGCT
TTTTGCCTAA CCACTTTATT AACCTTAATT CTATGCTGGT TTACACCACA ATTATTAGCG
CTTATTGGTG CGCAGGGGCT AGAATTAACC GAGGCTGGTA TCTATTTGCG GATTATTTTA
CCCACCTTTC CCATTTTGGC TATTGCGATG CAGATGGGCG CGACATTACG TGCAATGGGT
AATGCTAAAG CCGCCATGTT TGCTACATTA GGCGGCGGAC TGGTCAATGC GGTACTCGAT
CCTGTCTTTA TCTTTTTACT GAACATGGAT TTGCAGGGTG CCGCAGTGGC TTCCGTCATT
TCACGTTTTT TTATCTTGGC TATTGGCTTA TATTTTGTTT TTTTTAAATA CAAAATGCTT
ACTTTCCCTG ACTTTACTCT TTTCCGCGCA GATATAAAAA AAATATCTCA TGTTGCATTA
CCGGCAATAT TTACCCAAAT TGCAACCCCT ATCGGTAATT TATACGTGAC CTATGAAGTC
GCTAAGTTTG GCACTGAATA TATTGCTGGA TGGGCAATTA TTGGTCGCTT GATACCTGTA
TCTTTTGGTA TGATGTTTGC CTTGTCCGGT GCCGTTGGAC CTATTATTGG ACAAAATTAT
GGCGCACAAC AATTTGGTCG CGTCCGAAAA GTGTTAAATG AATCATTAAA ATTTATGACC
AGCTATACGA TCGTTATCGC ATTATTATTA TCAATGGCAC AAGAGATGAT AGTTAATTTA
TTTCATGCAC AAAACCAAAC CGCTGAGATT ATAAGAATAT TTTGTCAGTA TATCGCAGCC
AGCTTTTTAT TTAGCGGCAT TACCTTAATT GCAATGACTT ACCTTAATAA TTTAGGCTAC
GCAAAATATG CAACTTTTTT AAATGTCGCT AAAATGACAC TGGGAACTAT CCCTTTTGTC
ACTATTGGTG CTTTCTATTT TCAAGCACCA GGTATATTGT ATGGTCAAGC TGTAGGGAAT
ATTATATTTG GTATTTTATC TTTGTTATTA ACTTATAAGA TAATGAGTAA TATAGAAAAA
ACGAAATAA
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| Protein sequence | MQQAKFLQGS ILKHVITMSA TNAIGISALF MVDLVDIYFI SLLDNPALVA AIGYAAAILF
FTTSISIGLV TANSAKVAKA IGQKNRQKAC RYISHITLYA FCLTTLLTLI LCWFTPQLLA
LIGAQGLELT EAGIYLRIIL PTFPILAIAM QMGATLRAMG NAKAAMFATL GGGLVNAVLD
PVFIFLLNMD LQGAAVASVI SRFFILAIGL YFVFFKYKML TFPDFTLFRA DIKKISHVAL
PAIFTQIATP IGNLYVTYEV AKFGTEYIAG WAIIGRLIPV SFGMMFALSG AVGPIIGQNY
GAQQFGRVRK VLNESLKFMT SYTIVIALLL SMAQEMIVNL FHAQNQTAEI IRIFCQYIAA
SFLFSGITLI AMTYLNNLGY AKYATFLNVA KMTLGTIPFV TIGAFYFQAP GILYGQAVGN
IIFGILSLLL TYKIMSNIEK TK
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