Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2188 |
Symbol | |
ID | 4625343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2662950 |
End bp | 2663573 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639797326 |
Product | putative solute/DNA competence effector |
Protein accession | YP_943528 |
Protein GI | 119945848 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.345813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.724108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATA CAGAAAAATT TACTAACAAC AAACAAATAA TTAACTTTCT TACTGAACAG TTTCCGTTAT GTTTTACGGC GGCTAATAAT CCTGCAAAAC CTTTGAAAAT TGGCATATTT CAAGATCTTG CTGTACGTTT AGAAAATGAA GAGCGGGTTA GTAAAACTCA ACTACGTGGT GCTTTACGCC AATACACATT AAGTTGGCGT TACCTGCACT GCATAAAAGT ATCAGAAAAA CGTGTTGATT TAGATGGCAA TGAAGGTGAC GCTGTTTCAG CTGAGCATGC AGAGCATGCT TTAAAAACAC TCAAAGAAAG CAAAGATAAA GTGTTTGCTA AACAGAAAAA AGTGCAGAAA GAAGCCGCAC CAGCTAAAGC TGCCAAGCAA GTTAATGTCC CTAAACGCAC TGAGAAGAAA GAGCTTAAAA AAGAATCTTC GGTTGACCTG AGTAATTATA AAGAGGCAAC GCACTCTGAA CTTGCGTTGA AACAAACTGT CAAAGTTTTG CTGGGTAAAT CACCTGTTTC AGCTGTTGTT GTTGAAATTT CAAAGGATGA TATTCAGGTA GAACTGGCTT CTGGAATGAT GGTTAAAGTT AAAGCCAAAC ATCTAATTGT GTAA
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Protein sequence | MENTEKFTNN KQIINFLTEQ FPLCFTAANN PAKPLKIGIF QDLAVRLENE ERVSKTQLRG ALRQYTLSWR YLHCIKVSEK RVDLDGNEGD AVSAEHAEHA LKTLKESKDK VFAKQKKVQK EAAPAKAAKQ VNVPKRTEKK ELKKESSVDL SNYKEATHSE LALKQTVKVL LGKSPVSAVV VEISKDDIQV ELASGMMVKV KAKHLIV
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