Gene Ping_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2178 
SymboldinG 
ID4625333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2653196 
End bp2655256 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content41% 
IMG OID639797316 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_943518 
Protein GI119945838 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.647766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCAG ATTCCCTAAA AATAAAGATC CGGGCAGGTT ATACGCTTAT TACTCAGGCT 
TTACCTCATT TTTCAACGCG TAAAGCACAG AATTATCTGG TCGCTGAAAT CGCAAAAGTA
CTCGCGGGTG AATATGATAA ATCACGACGC ATACTGGTTG CAGAGGCCGG TACCGGGATT
GGCAAATCAT TAGCTTATAT ACTAGCAGCG CTACCCGTCG CGCAACATGC AAAGAAAAAA
CTCATTATTT CGACTGCGAC AATCACTTTG CAGGAGCAAT TAATGGTTAA GGATCTGCCT
TTTTTTTTGC GCCATAGTGA ATTTAAATTT ACTTTTACCT TAGCTAAAGG GCGTCAGCGT
TATTGCTGTG AACATAAACT GTTCAGCACC CAACAAGGCA CGGAACAACA GGCTTTATTT
ACCGAAAAAC CACAAGCAGG TGATCAGGTA TTATTAACAC GCCTACATGA AGCGTATCTT
GCGGGTAAAT GGTTAGGGGA TCGCGATAGT TGGCCAACAC CCATTCCAAA TCGCGTCTGG
CAACAGATCG TTTCCGATAA ATTCAGCTGT AAACGCGCCT TAGCGAATCA TCGCCAGTGC
CCTTTTCATC GTGCTCGCGA TGCTATCAAT AAAGCAGATG TTATTGTTGT CAACCACGCA
TTACTGTTGG CCGATCTCGA GTTGGGAGGG GGAATCATTT TACCCGAACC TGATAACTGT
TTTTATGTCC TAGACGAAGC CCATCACCTG CCCAAAATAT CCAGAGATTT TTCCAGTGCG
CGTGCCAGTA TTAAGGGCAG TCAAGATTGG CTTAAAAAAA TCAACCAGCT AAGTCAACAT
ATTAATAAGA CCATTAAACG CCATACGACT ATTACACCGG GTATTAATAT GCTCGAAAGC
GCACAAGAAA TAATAAAGGA GCTGAAAACG GTGGAGTTAT TTTTTAACAA TAACCCCAGC
TACTTTAATG AATCAGATAA ATACCGATTT GCATTGGGGG AGTTACCCGA AACATTACAT
CACCCCGCCT GTCATTTAAA AGAAGAAAGT AAAAAATGTT TATCGGCTTT AAATAAACTT
TCAAATATTA TCAGTGAAGA AATCAAAGAC GGTAATGTTA AAACAAAGGA TGTTGAACCT
TTAATGATTG AACTGGGATT TTTCCAGCAG CGTATCGAAA ACATGCAGAC ACTGTGGGTT
ATGCTGACCA GAGAAAAGAC AACCAAGCAG GCACCTATCG CTGCGTGGGC TGAAAGAGAG
AAAGCAGAAA TTTATTTAAA TGCTTCACCG ATAGAGGTCG GGGGAATATT AGAGAAGATA
TTTTGGTCAC AGGCTGCAGG GATTATTTTA TGCTCCGCCA CATTGACCTC ACTGAATAAT
TTTGAATACT TTAAGCGCCA AAGCGGATTA AAAAGCAATG ATGGCACGCA ATACTTGCGC
TTAAAGTCCC CCTTTAATTA CCCCGCCATC CCTTTAATTA TTGCAGATAT GGAAAGCGAT
CCGACTCAAG CGGGTTTTGA TGATGAACTG ATTGAAAAAA TAGAAAATTA TTTACGCGAC
AACGAGGGTA ATTTAGTTTT ATTTGCATCC TACTGGCAAA TGAATTTAGT GGCCGATAAG
CTCAATAAGA AATACCAAGA GGCTTTATTA ATACAAGGCG TCTTGTCGCG CAGCAAACTT
ATCAAAACAC ATAAGCAGCG CTGTGATCAA GGCAAAACAA GTATTATCTT CGGTACCGGC
GGATTATCCG AGGGACTGGA TTTGCCCGGA CATTATTTGA CCAACTTGAT TATTACCAAA
TTACCTTTCG CCGTACCAAA CTCTCCCGTT GAAGAAGCGC ATTCTGAATG GATAAAAGCC
CAAGGTGGCA ACCCTTTTTT ACAGCTTTCT ATTCCAGAGA CAAGTAAAAA ACTGATCCAG
TCATGTGGAC GATTGATTAG AAAAGAAAAT GACACAGGGC GAATTATTAT ATTGGATAAG
AGAGTAAAAA CGAAACGTTA CGGAAAAGGT TTACTGGATG CGCTTCCCCC TTTTGCGATT
CAATTTGAGC ATAAACATTA A
 
Protein sequence
MLPDSLKIKI RAGYTLITQA LPHFSTRKAQ NYLVAEIAKV LAGEYDKSRR ILVAEAGTGI 
GKSLAYILAA LPVAQHAKKK LIISTATITL QEQLMVKDLP FFLRHSEFKF TFTLAKGRQR
YCCEHKLFST QQGTEQQALF TEKPQAGDQV LLTRLHEAYL AGKWLGDRDS WPTPIPNRVW
QQIVSDKFSC KRALANHRQC PFHRARDAIN KADVIVVNHA LLLADLELGG GIILPEPDNC
FYVLDEAHHL PKISRDFSSA RASIKGSQDW LKKINQLSQH INKTIKRHTT ITPGINMLES
AQEIIKELKT VELFFNNNPS YFNESDKYRF ALGELPETLH HPACHLKEES KKCLSALNKL
SNIISEEIKD GNVKTKDVEP LMIELGFFQQ RIENMQTLWV MLTREKTTKQ APIAAWAERE
KAEIYLNASP IEVGGILEKI FWSQAAGIIL CSATLTSLNN FEYFKRQSGL KSNDGTQYLR
LKSPFNYPAI PLIIADMESD PTQAGFDDEL IEKIENYLRD NEGNLVLFAS YWQMNLVADK
LNKKYQEALL IQGVLSRSKL IKTHKQRCDQ GKTSIIFGTG GLSEGLDLPG HYLTNLIITK
LPFAVPNSPV EEAHSEWIKA QGGNPFLQLS IPETSKKLIQ SCGRLIRKEN DTGRIIILDK
RVKTKRYGKG LLDALPPFAI QFEHKH