Gene Ping_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2152 
Symbol 
ID4625938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2626719 
End bp2628290 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content39% 
IMG OID639797292 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_943494 
Protein GI119945814 
COG category[R] General function prediction only 
COG ID[COG3596] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TTAAGGATCT ATTTTTACTC CTCTCTGAGT TATCAGGCGG GCGCTGGGGC 
ATTGCTGTCA TCTCTGCCGT ATTGCCAATG TTGGCGATGA TGGGATTTGG ATTATTTCTA
GCGATTAAAT ATGATTATAT TCTGGCGCTT TCTTTAATTA TTGCGCTCAG CACGCTCATT
ATTAGCCTGC CATTGTTCTT GCTGAGCCGA GTTTCAAATA GCAAACACCA AGAAAATACT
GTTGCAGCCG ATGGGACAGT TGAAGAGGGA TTAGTCAAAG CTTCTGCTGA CTGGTCACAA
AATGAAATGC TGATTTGGGC GCGAGTAAAG CTATATTCTA GAGAGTTACT GGCGGAAAAT
AATGAGTGGT CAAATCTTGA TTCTGCAGGC ATAAAAATCC TTGAATTTAT AGCCCTTGAG
TTTGACAAAG AAGCGCTAAA TTTTAGCCTT CCTGAAGGAT TAAAGGTCTT TGAAGAAGTC
AGTAAACGCT ATCGTAAATT ACTGGATAAA TATGGTCTCG CGATTGAAGC GTTAAAAATT
TCACACTTAA AAGCAGGTTA TGATGCTTAT GATAAATACG GTGAGATAGG TGAAAAAGCA
ATAAATATAG CAATTTGGGC TAATCATGCT AAAAATGCTT ATCTAAATCC ATCAAAGTTT
GCGATTGACT TACTTAATCA GCAATCAACA TCCGGCATGA CTAAGGGATT TTTTGAAGAT
ATGCAGCTTA AAGCCAAGCA AGCTTTACTC GATGAAGTGT CTTGTGTTGC GATTGATTTG
TATAGCGGGC GCTTTAGTTT TGATGAAGAG AATCTATCCG CTTCAACGGT TGCCGATAAA
GACCAGCAGA GAATGGTGTC TGAATTAGAG CCGATACGCA TTGTGATGGT GGGGCAAACT
AATGCGGGAA AATCCTCTAT TATAAATGTA CTCAAAAATG AGCTGGTTGC TGAAGTGGAT
ATATTACCCT CGACTAAGGG GGCGACAGTC TATACGGCTA TGCTGAATGA TGCAGAAGTG
CGCATTGTTG ATCTTCACGG TTTGAATGGT GATGAAAAAA AAGAAACACT TATGCTGTTA
GAAATGACCC ACGCAGACCT GATAGTTTGG GTACTAAAAG CAAATCAGCC AGCACGGGAT
CTTGATAAAA AATTGAAAGC TAAGTTTGAT GATTTTTATT TATATGCCAA GCATATTTCA
CGTAAGAAAC CTGCGGTCAT TTGCGTTGTT AACCAAGTTG ATAAGCTTAA ACCTGTTTCT
GAGTGGCAGC CTCCTTATAA TCTGGATGAC CCCACTACGG TAAAGGCCAA AATAATTAGT
CAGGCTGTCG CTTACAACCA CAAGCTTTTA ATGCCCGACA GTATTCTGGC ACTGTCTATT
GCCTTGAATA AAAAGAGCTT CAATATTGAG AAGCTTAAGC AAGTTATCAG TCAGAAAATT
GCTAATGCAA GTAATGTTCA AAGAAATCGA CAGCGCGTAG AGGCAATTTA TAAAGGTGTC
GGTATTAAAA AGCAGTTCGG TCGTGTGGTT AATTCTAGTA AGAAACTCAC GTGGAGTATA
TTAACAAAGT GA
 
Protein sequence
MNKIKDLFLL LSELSGGRWG IAVISAVLPM LAMMGFGLFL AIKYDYILAL SLIIALSTLI 
ISLPLFLLSR VSNSKHQENT VAADGTVEEG LVKASADWSQ NEMLIWARVK LYSRELLAEN
NEWSNLDSAG IKILEFIALE FDKEALNFSL PEGLKVFEEV SKRYRKLLDK YGLAIEALKI
SHLKAGYDAY DKYGEIGEKA INIAIWANHA KNAYLNPSKF AIDLLNQQST SGMTKGFFED
MQLKAKQALL DEVSCVAIDL YSGRFSFDEE NLSASTVADK DQQRMVSELE PIRIVMVGQT
NAGKSSIINV LKNELVAEVD ILPSTKGATV YTAMLNDAEV RIVDLHGLNG DEKKETLMLL
EMTHADLIVW VLKANQPARD LDKKLKAKFD DFYLYAKHIS RKKPAVICVV NQVDKLKPVS
EWQPPYNLDD PTTVKAKIIS QAVAYNHKLL MPDSILALSI ALNKKSFNIE KLKQVISQKI
ANASNVQRNR QRVEAIYKGV GIKKQFGRVV NSSKKLTWSI LTK