| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2140 |
|---|
| Symbol | |
|---|
| ID | 4625926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2607030 |
|---|
| End bp | 2609678 |
|---|
| Gene Length | 2649 bp |
|---|
| Protein Length | 882 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639797281 |
|---|
| Product | fused multi-sensor protein |
|---|
| Protein accession | YP_943483 |
|---|
| Protein GI | 119945803 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.236911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.359885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGATA AAAAAACACA AAGTATCTAC GTTTATAAAA TTTTGATCAC CGCTGGCTTG
GTGGCCTGTC TGGTACTTGT ACTGCTCATC TTTGGTAGTT ACATGGTTGC AGATGGCGTT
ATTAAGACCA ACCAAAAAAA CAGTGCTTTG ATCAATGTCA GTGGTCGACA GCGTATGCTT
TCTCAGAGCA TTGCCGATAT CAGCAGTAAT CTTATAAGTT ATCCTGAAGA ACGACAAAAC
TTACGTCACA GACTATTGGA AGTGTGCAAT TTAATAGAAA AGTCCCACCA GAGTCTGCTT
TATGGGGATC AAGCTATAGG ATTATTCGGT GACCCCTCGA GTGAGATCAA GCGGATGATG
TTTGAACCAC CACATAGTGT GGATAAGGGC GTGAGTGATT ATATTGAGGC TGCCCGTTCC
TTGATTAATA CTTCTGACAA CAAGTTAACC ATCGCTAATC CAGACATTCG CTATATTCAT
GCTAGCAGTG GAGTATTGCT TAATAACTTA AATGATATAA CTAATCAGTA TCAGCGTGAA
GGCGAGGCTG GTCTGGCCGA CCTACGCGAT CAGCAGAAAA TTATTATGGC CACGCAGATT
TCAGTCATCT TGCTGCTCAC TCTGCTTATC TTTTTGCCAT TGGTGCGCCG AGTGCATCGC
GAGATACTTA AAGCTGTCAT GTCAGAAAAA CACTTATCTA GCGTTATAGA TCATATGTTG
GATGGTCTGA TTACTATCGA TGCGCAGTGC ATAGTGCAAA GTTTCAATCC TGCCGCTGAA
CGCATCTTTG GCTATAAAAG CGAAGAGGTG GTGGGCGGCA GCGTCAATAT CTTAATGCCG
GAACCTGATT ATAGCGAGCA CAATGATTAT CTTAAACGCC ATCTGGATAC GGGAATAACG
AATACTACCG GCATCAGTCG CAAGGTGGTG GGTAAACGTA AGGATGGCAG TACTTTTCCA
CTTGATTTGT CTATCAATGA AATGCATCTT AGTGAAACAC ACCGGTTCTT TTGTACGGTG
CGTGATATCA GCGTGCGTCA ACAACACGAA CAACAACTGA TTGCTGCCAA GGAAACAGCA
GAACAAGTTA GTCAAGCCAA GGATTCATTC CTTGCCACTA TGAGTCATGA GATACGTACT
CCTCTTGCCG GAATGCTGGG CATGCTCGAG GTGCTTTCTA TGTCGCCGCT TGATCACGAG
CAGGAGCCAA TACTGAAAGC AGCGTGGGAC TCTGCCAGAA ATCTGTTACG AATTGTCAAC
GACATTCTCG ATTGGTCAAA AATTCAAGAT GGAAAATTAA TCCTTTCTCC ACAATCGACC
TCAATTCCCA TGCTGCTACA AGAGGTGGTC AATACCTATT CACATGTCGC CAGTGCTAAA
AATTTGAAGT TGTGGCAGCA TGCCGATTCC CAACTCAGCG CTGCGCATAT TGTCGACCCG
CTTCGCCTTT CGCAGGTACT GAACAACTTT GTCAGCAATG CGCTCAAATT TACCGAACAA
GGAGAAATCG AGCTGTGCGC TGAACTCTTA GAGCAACTTG AGAGCGGTGA GCGGATACGT
TTTTTTGTCA AGGACACCGG TGTGGGCATC CCCAAGATTG TTCAGCCAAA ATTGTTTGAA
CGCTTCCAAC AGGAGAGTGC AGATACCGCC CGCCAATATG GTGGAACTGG ACTAGGACTG
TCGATCTGTC TGCATCTGGC AGAATTTCTG GATGGGAAGA TCGAACTGGT CAGTGAGCCA
GGGCTGGGTG CCATTTTTAG CATTACCGTG ATTCTGCCCA TTTCTGCGGC GCCCGGCGAG
GCATTACCAA CGCCAGTCCC TGTCGTTGAG CAGAAGAAGA TAAGGCCACT GTTTGACAAC
CGCGAGGATG CACCGATGAT ATTGGCGGTA GATGATCATC CTATCAATCG CGACCTGCTG
GCGCGCCAGA TCACGTTGCT TGGTTTACGA GTTGAGACGG CTGAGGATGG GCTGGTCGCA
TTGTCAAAGT GGAGGGCAGG GCACTTTGCG CTGGTTATCA CTGACTGTCA TATGCCGGAA
ATGGATGGTT ATTCCTTTGC ACGAGCGGTT CGCAAGATAG AAATGGAGGA AATACTTCCA
CGCACCCCAA TCATTGCGTG GACGGCCAAT GCGCGCATTG AGGAAGGGCA GTTTTGTGAG
GATGCCGGGA TGGATGGACT ATTGGTCAAA CTTAGCGGTA TGACACTATT AAAAACGATG
CTGGCCAAGT GGCTGTCGAT CCCTGCACCA GAGAAGAATC AATTCACCGC TTATGCTGGC
GGTGAGACTA AAGGCCCTAT CGATTATGCC GAGCTTAGCA AGGTTGTGCC GGACAGCGCC
GAGCAGATTC AAGTGCTGTA TGATTTTCAG CAATACATTA GCGCTGACCG CGGCAAATTG
ATTGAGATGT TAGTGCAGGG TGATCCTCTC AGTGTGCAGT ATACCGCCCA CCGCATTAAA
GGTAGTTGCC TGATGGTGGG CGCCACCGAG ATGGCAAGTG CGTATGCAAC GATCGAACAG
ACTGCAATGG AAGGAAATAT AGACGGTGCA CGAACAAGAA TGACCGAACT GCATGATGCA
TTCGAACGAT TTGATAGCTA TTTGGCTACA TTAACAGACT CGAAAGGAGA GGCGGATGAA
AGCGAGTGA
|
|---|
| Protein sequence | MGDKKTQSIY VYKILITAGL VACLVLVLLI FGSYMVADGV IKTNQKNSAL INVSGRQRML
SQSIADISSN LISYPEERQN LRHRLLEVCN LIEKSHQSLL YGDQAIGLFG DPSSEIKRMM
FEPPHSVDKG VSDYIEAARS LINTSDNKLT IANPDIRYIH ASSGVLLNNL NDITNQYQRE
GEAGLADLRD QQKIIMATQI SVILLLTLLI FLPLVRRVHR EILKAVMSEK HLSSVIDHML
DGLITIDAQC IVQSFNPAAE RIFGYKSEEV VGGSVNILMP EPDYSEHNDY LKRHLDTGIT
NTTGISRKVV GKRKDGSTFP LDLSINEMHL SETHRFFCTV RDISVRQQHE QQLIAAKETA
EQVSQAKDSF LATMSHEIRT PLAGMLGMLE VLSMSPLDHE QEPILKAAWD SARNLLRIVN
DILDWSKIQD GKLILSPQST SIPMLLQEVV NTYSHVASAK NLKLWQHADS QLSAAHIVDP
LRLSQVLNNF VSNALKFTEQ GEIELCAELL EQLESGERIR FFVKDTGVGI PKIVQPKLFE
RFQQESADTA RQYGGTGLGL SICLHLAEFL DGKIELVSEP GLGAIFSITV ILPISAAPGE
ALPTPVPVVE QKKIRPLFDN REDAPMILAV DDHPINRDLL ARQITLLGLR VETAEDGLVA
LSKWRAGHFA LVITDCHMPE MDGYSFARAV RKIEMEEILP RTPIIAWTAN ARIEEGQFCE
DAGMDGLLVK LSGMTLLKTM LAKWLSIPAP EKNQFTAYAG GETKGPIDYA ELSKVVPDSA
EQIQVLYDFQ QYISADRGKL IEMLVQGDPL SVQYTAHRIK GSCLMVGATE MASAYATIEQ
TAMEGNIDGA RTRMTELHDA FERFDSYLAT LTDSKGEADE SE
|
|---|
| |