| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2138 |
|---|
| Symbol | |
|---|
| ID | 4625924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2605833 |
|---|
| End bp | 2606576 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639797279 |
|---|
| Product | cyclic-di-GMP regulatory protein |
|---|
| Protein accession | YP_943481 |
|---|
| Protein GI | 119945801 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.106581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.507005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGTG TGCGCGCGAA ACAATTTGAG CCATTTTTTC AGCCAAAAGT AGATTTTAAA
ACGGGTCGTA TTATCGGTGC TGAGGCGCTG GCGCGGTGGC TACATTCAGA GCACGGGGTG
ATCACGCCTT ATGCATTTAT CCATTTGCTT GAACAGAGCA GCGAGATAGA CGAACTGACA
TTTCTGATGC TGGAGAAAGC GACGGTTGCG TGCCATTTAT TACAGGATCA GGGTTATGGG
ATGACAATTT CGGTCAATCT ATCATTGACC TCACTCAGCG ATATTACGCT GGCAAAAAGA
ATTACTCAGG TGGTGCGGGA TGCCGGCGTT GATCCGACTA AAATCATTCT TGAAATCACC
GAGTCAGCAG CGATGACCGA GGTTGCCCCT GCCTTGGAAA ATTTGGCAAG ATTGCGCATG
CACGGTTTCG GTCTTTCTAT CGACGACTAC GGCACGGGCT ACGCCAGCAT GCAGCAGCTC
ACGCGGATTG CCTTCAATGA ACTAAAAATA GACCAGTCTT TTGTGAAGGA CGTCGCCACT
AATCAGTCGC TACGAATCAT CGTTGAGTCG AGCATCAACA TGGCGCGAAA GCTACTTGTT
AATAGCACTG CCGAGGGTGT GGAGACACAG GAGGATTGGG ATACAATGAA GAGCATTGGG
TGTGATACAG CGCAGGGTTA TTTTATCGCT AAGCCAATGA ATTTAAATGC ATTTATTGAA
TTTTGTGCGG AATATTCAGC CTGA
|
|---|
| Protein sequence | MIGVRAKQFE PFFQPKVDFK TGRIIGAEAL ARWLHSEHGV ITPYAFIHLL EQSSEIDELT
FLMLEKATVA CHLLQDQGYG MTISVNLSLT SLSDITLAKR ITQVVRDAGV DPTKIILEIT
ESAAMTEVAP ALENLARLRM HGFGLSIDDY GTGYASMQQL TRIAFNELKI DQSFVKDVAT
NQSLRIIVES SINMARKLLV NSTAEGVETQ EDWDTMKSIG CDTAQGYFIA KPMNLNAFIE
FCAEYSA
|
|---|
| |