Gene Ping_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2129 
Symbol 
ID4623986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2595391 
End bp2595789 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID639797271 
Productendoribonuclease L-PSP 
Protein accessionYP_943473 
Protein GI119945793 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0901999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00790244 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACTC AAAATAAAAA ACATCTGGTT AAGACATCTC TTTTCGCTTC AAAAGCACCA 
CTTGAATGGG CAATTGTCAA TAATGGTACG CTCTATACAG CACAAATTCC CATTGATGAT
ACTGGTGCGG TAGTCGCAGG TGGAATAGAA GCTCAAACTC GGCAAACCCT CAATAACCTT
GTTCATACAT TGGAATGTGC CGGTGAATCG TTGGATTCAG TGCTTCAAGT ACTGATTTAC
GTGACTGATC GCGAGTATCT GAAAACCGTG AACAGCGTTT ACGCTGAATA TTTCAACGCC
CCTTACCCAA ACCGTGCAGC CATGGTTGTT GCAGGGCTAG CACGCGAAGA AATGCTGGTG
GAATTTGTGG TCTATGCCGC GGCCTCTCAG CCTGAATAG
 
Protein sequence
MNTQNKKHLV KTSLFASKAP LEWAIVNNGT LYTAQIPIDD TGAVVAGGIE AQTRQTLNNL 
VHTLECAGES LDSVLQVLIY VTDREYLKTV NSVYAEYFNA PYPNRAAMVV AGLAREEMLV
EFVVYAAASQ PE