Gene Ping_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2120 
Symbol 
ID4623977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2579841 
End bp2582516 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content46% 
IMG OID639797262 
Productaconitate hydratase 1 
Protein accessionYP_943464 
Protein GI119945784 
COG category[C] Energy production and conversion 
COG ID[COG1048] Aconitase A 
TIGRFAM ID[TIGR01341] aconitate hydratase 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.731402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0663463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGAA ATAAAATTAA TATTGATGCT AAAAATACTT TCACGGTAAA TGGTCAAGTT 
TATAGCTATT ATGCGATAAA TAAAGGCGAA TTAGCGGGTA ACGATTCGAT AACACGCTTG
CCCGTCTCAA TCAAAGTGTT GCTGGAAAAT TTATTACGCC ATCAACAGGA TAATGGCGGC
AGCAGAAAAG AAATTGAAGC GCTCGCCAGC AGTCAAGGAC GAGGCAGCAC GACCGAAATT
AACTATCAGC CTGCGCGCGT TTTAATGCAG GACTTTACCG GCGTACCGGC CGTTGTTGAT
CTTGCCGCGA TGCGTAATGC ATTAGTTAAA CAGGGACTTG ACCCGCAAAA AATAAATCCA
TTGGCTAAAG TTGATCTGGT GATCGACCAT TCGGTTAACG TCGACAAGTT TTCAAGCAAA
TCCGCTTTTG ATGAAAACGT GGCTATCGAA ATGGCGCGCA ATAAAGAACG TTATGAGTTT
TTAAAATGGG GGAAACAGGC CTTTGAAAAT TTCAGCGTAG TCCCTCCGGG TACTGGTATT
TGTCACCAGG TTAATCTTGA ATATCTGGCT AAAGTTGTCT GGAGTGAAAC CACTGAGAAT
GAGTCTCTGG TCTATCCTGA TACGCTGGTT GGTACCGACA GCCATACCAC TATGATTAAT
GCGCTGGGCG TTTTAGGTTG GGGCGTAGGC GGGATTGAAG CTGAGGCTGT GATGCTTGGA
CAACCCATTT CAATGCAGAT CCCGGATGTG GTCGGATTTG AACTGACAGG CAGATTGGCT
GAGGGGATCA CCGCGACGGA TCTGGTGCTG CAGGTTGTTC AAATGCTGAG GAAGCATGGT
GTGGTCGGAA AATTTGTGGA ATTTTATGGT GCCGGTCTTG CTCATTTACC CCTGGCCGAT
CGCGCGACTA TAGCCAATAT GGCACCGGAA TATGGTGCTA CCTGCGGATT TTTCCCGGTC
GATCAGCAAA CCCTGAATTA TTTACAATTG ACGGGTCGTG ACAAGCAAAC TATTGATTTG
GTTGAATCTT ATTCTAAACT ACAAGGGTTG TGGCGTGATG AGACGACCCC AAAGGCTGAT
TTTTCCGATA CTTTATTGCT TGATATGAGC GATATTGAAC CTAACCTTGC AGGACCAGAC
CGGCCGCAGG ACAGAGTCCC TATGCGCCAG TTAAAAACGG CGACCGATGA CTTTATTGAT
CTCAATGGAA AGGGTCAGCA AAAGACCACG GATTTTCCTA TCAATGACAG TGATCAATCA
CTCCATCATG GTTCACTGGT GATCGCTGCT ATTACCTCCT GCACTAATAC CTCTAATCCT
GCGGTTATGC TGGCAGCCGG ACTGCTGGCT AAAAAAGCGC TGGCAAAAGG ATTGGTTAAA
CAACCCTGGG TTAAAACCTC ACTTGCCCCC GGCTCACGGG TAGTGACCGA TTATCTGGTG
GAAACAGGAT TACAACAATC CTTAAATACA CTCGGCTTTA ATCTGGTGGG TTATGGCTGT
ACTACCTGCA TTGGCAATTC AGGCCCTTTA CCAAAGCCTG TTCAGGAATG TATTGAAGAA
AACGATCTTA TTGTGAGTGC TGTTTTGTCA GGCAACCGTA ATTTTGCAGG ACGAATTCAT
CCACAGGTTA AGGCTTCCTG GTTAGCATCC CCCCCTTTAG TGGTGGCCTA CTCACTGGCC
GGCACTACTC GAATAGATCT CAGTCAGGAT CCAATCGGCA CAGGCAGTGA CGGTGAAAAG
GTTTATTTAA AAGATATCTG GCCGAGTAAC GCGGAAATCA CCGAGTTGCT AAAAAGTGTC
AGTCATCAGA TGTTCGAAAA GCGCTATAGT GCAGTATTTG ACGGCGATAA AGAATGGCAG
GCAATTCAGT CCGGAGAAGA AGCCAATTAT CAGTTTTCCG ACGAGTCCAC CTATATTCAA
AAACCGCCTT TTTTCGAACC ACAATATCGC GATAATTTTA GTAATATTGT TGATGCGCCT
ATTCTGGTTA TGCTTGGAGA TTCGGTTACA ACGGATCATA TTTCACCCGC AGGTGCCATT
CCCAAAGACA GCCCCGCCGC TCAATTTTTA CGCAATCATG GGATTGATGA AAAAGATTTT
AACTCTTACG GCTCACGACG CGGCAATCAT GAAATCATGA TGCGGGGTAC CTTTGGTAAT
ATTCGTATCC GTAATGAGAT GACGCCGGAC AAGGAAGGTG GCTACACCCA TTTACAGGGT
CAGTCGCAAG CCATGTTCAT CTTTGATGCC GCCATGCGTT ACCAGCAGGA AAAAAGATCC
AGTGTGGTTA TTGCTGGTAA AGAATATGGT ATGGGATCGA GTCGAGACTG GGCTGCTAAA
GGAACTTTAC TGCTTGGTGC CAAAGCTGTT ATTGCCGAAA GTTTTGAGCG AATTCATCGT
GCTAATCTGG CTGGAATGGG CGTATTACCG TTGCAGTTTA TGGCCGGTGA GGATCGTAAA
TCATTGCAGT TAACTGGTGA TGAATCCTTC GATATTATGG GGTTAGAAGG TGAAATGAAC
GCCAATCAAA CACTTGATGC GGTTATTCAT TATCCATCCG GTAAACAGCG TAAAATTCAA
TTGTTGTCTC GTCTCGATAC AGCAATTGAG GTTGATTATT ACCGCGCGGG CGGTGTACTC
ACTTATGTGC TTAACCGCAT AGTTTCTAAA GGATAA
 
Protein sequence
MSGNKINIDA KNTFTVNGQV YSYYAINKGE LAGNDSITRL PVSIKVLLEN LLRHQQDNGG 
SRKEIEALAS SQGRGSTTEI NYQPARVLMQ DFTGVPAVVD LAAMRNALVK QGLDPQKINP
LAKVDLVIDH SVNVDKFSSK SAFDENVAIE MARNKERYEF LKWGKQAFEN FSVVPPGTGI
CHQVNLEYLA KVVWSETTEN ESLVYPDTLV GTDSHTTMIN ALGVLGWGVG GIEAEAVMLG
QPISMQIPDV VGFELTGRLA EGITATDLVL QVVQMLRKHG VVGKFVEFYG AGLAHLPLAD
RATIANMAPE YGATCGFFPV DQQTLNYLQL TGRDKQTIDL VESYSKLQGL WRDETTPKAD
FSDTLLLDMS DIEPNLAGPD RPQDRVPMRQ LKTATDDFID LNGKGQQKTT DFPINDSDQS
LHHGSLVIAA ITSCTNTSNP AVMLAAGLLA KKALAKGLVK QPWVKTSLAP GSRVVTDYLV
ETGLQQSLNT LGFNLVGYGC TTCIGNSGPL PKPVQECIEE NDLIVSAVLS GNRNFAGRIH
PQVKASWLAS PPLVVAYSLA GTTRIDLSQD PIGTGSDGEK VYLKDIWPSN AEITELLKSV
SHQMFEKRYS AVFDGDKEWQ AIQSGEEANY QFSDESTYIQ KPPFFEPQYR DNFSNIVDAP
ILVMLGDSVT TDHISPAGAI PKDSPAAQFL RNHGIDEKDF NSYGSRRGNH EIMMRGTFGN
IRIRNEMTPD KEGGYTHLQG QSQAMFIFDA AMRYQQEKRS SVVIAGKEYG MGSSRDWAAK
GTLLLGAKAV IAESFERIHR ANLAGMGVLP LQFMAGEDRK SLQLTGDESF DIMGLEGEMN
ANQTLDAVIH YPSGKQRKIQ LLSRLDTAIE VDYYRAGGVL TYVLNRIVSK G