Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2120 |
Symbol | |
ID | 4623977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2579841 |
End bp | 2582516 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639797262 |
Product | aconitate hydratase 1 |
Protein accession | YP_943464 |
Protein GI | 119945784 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.731402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0663463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGAA ATAAAATTAA TATTGATGCT AAAAATACTT TCACGGTAAA TGGTCAAGTT TATAGCTATT ATGCGATAAA TAAAGGCGAA TTAGCGGGTA ACGATTCGAT AACACGCTTG CCCGTCTCAA TCAAAGTGTT GCTGGAAAAT TTATTACGCC ATCAACAGGA TAATGGCGGC AGCAGAAAAG AAATTGAAGC GCTCGCCAGC AGTCAAGGAC GAGGCAGCAC GACCGAAATT AACTATCAGC CTGCGCGCGT TTTAATGCAG GACTTTACCG GCGTACCGGC CGTTGTTGAT CTTGCCGCGA TGCGTAATGC ATTAGTTAAA CAGGGACTTG ACCCGCAAAA AATAAATCCA TTGGCTAAAG TTGATCTGGT GATCGACCAT TCGGTTAACG TCGACAAGTT TTCAAGCAAA TCCGCTTTTG ATGAAAACGT GGCTATCGAA ATGGCGCGCA ATAAAGAACG TTATGAGTTT TTAAAATGGG GGAAACAGGC CTTTGAAAAT TTCAGCGTAG TCCCTCCGGG TACTGGTATT TGTCACCAGG TTAATCTTGA ATATCTGGCT AAAGTTGTCT GGAGTGAAAC CACTGAGAAT GAGTCTCTGG TCTATCCTGA TACGCTGGTT GGTACCGACA GCCATACCAC TATGATTAAT GCGCTGGGCG TTTTAGGTTG GGGCGTAGGC GGGATTGAAG CTGAGGCTGT GATGCTTGGA CAACCCATTT CAATGCAGAT CCCGGATGTG GTCGGATTTG AACTGACAGG CAGATTGGCT GAGGGGATCA CCGCGACGGA TCTGGTGCTG CAGGTTGTTC AAATGCTGAG GAAGCATGGT GTGGTCGGAA AATTTGTGGA ATTTTATGGT GCCGGTCTTG CTCATTTACC CCTGGCCGAT CGCGCGACTA TAGCCAATAT GGCACCGGAA TATGGTGCTA CCTGCGGATT TTTCCCGGTC GATCAGCAAA CCCTGAATTA TTTACAATTG ACGGGTCGTG ACAAGCAAAC TATTGATTTG GTTGAATCTT ATTCTAAACT ACAAGGGTTG TGGCGTGATG AGACGACCCC AAAGGCTGAT TTTTCCGATA CTTTATTGCT TGATATGAGC GATATTGAAC CTAACCTTGC AGGACCAGAC CGGCCGCAGG ACAGAGTCCC TATGCGCCAG TTAAAAACGG CGACCGATGA CTTTATTGAT CTCAATGGAA AGGGTCAGCA AAAGACCACG GATTTTCCTA TCAATGACAG TGATCAATCA CTCCATCATG GTTCACTGGT GATCGCTGCT ATTACCTCCT GCACTAATAC CTCTAATCCT GCGGTTATGC TGGCAGCCGG ACTGCTGGCT AAAAAAGCGC TGGCAAAAGG ATTGGTTAAA CAACCCTGGG TTAAAACCTC ACTTGCCCCC GGCTCACGGG TAGTGACCGA TTATCTGGTG GAAACAGGAT TACAACAATC CTTAAATACA CTCGGCTTTA ATCTGGTGGG TTATGGCTGT ACTACCTGCA TTGGCAATTC AGGCCCTTTA CCAAAGCCTG TTCAGGAATG TATTGAAGAA AACGATCTTA TTGTGAGTGC TGTTTTGTCA GGCAACCGTA ATTTTGCAGG ACGAATTCAT CCACAGGTTA AGGCTTCCTG GTTAGCATCC CCCCCTTTAG TGGTGGCCTA CTCACTGGCC GGCACTACTC GAATAGATCT CAGTCAGGAT CCAATCGGCA CAGGCAGTGA CGGTGAAAAG GTTTATTTAA AAGATATCTG GCCGAGTAAC GCGGAAATCA CCGAGTTGCT AAAAAGTGTC AGTCATCAGA TGTTCGAAAA GCGCTATAGT GCAGTATTTG ACGGCGATAA AGAATGGCAG GCAATTCAGT CCGGAGAAGA AGCCAATTAT CAGTTTTCCG ACGAGTCCAC CTATATTCAA AAACCGCCTT TTTTCGAACC ACAATATCGC GATAATTTTA GTAATATTGT TGATGCGCCT ATTCTGGTTA TGCTTGGAGA TTCGGTTACA ACGGATCATA TTTCACCCGC AGGTGCCATT CCCAAAGACA GCCCCGCCGC TCAATTTTTA CGCAATCATG GGATTGATGA AAAAGATTTT AACTCTTACG GCTCACGACG CGGCAATCAT GAAATCATGA TGCGGGGTAC CTTTGGTAAT ATTCGTATCC GTAATGAGAT GACGCCGGAC AAGGAAGGTG GCTACACCCA TTTACAGGGT CAGTCGCAAG CCATGTTCAT CTTTGATGCC GCCATGCGTT ACCAGCAGGA AAAAAGATCC AGTGTGGTTA TTGCTGGTAA AGAATATGGT ATGGGATCGA GTCGAGACTG GGCTGCTAAA GGAACTTTAC TGCTTGGTGC CAAAGCTGTT ATTGCCGAAA GTTTTGAGCG AATTCATCGT GCTAATCTGG CTGGAATGGG CGTATTACCG TTGCAGTTTA TGGCCGGTGA GGATCGTAAA TCATTGCAGT TAACTGGTGA TGAATCCTTC GATATTATGG GGTTAGAAGG TGAAATGAAC GCCAATCAAA CACTTGATGC GGTTATTCAT TATCCATCCG GTAAACAGCG TAAAATTCAA TTGTTGTCTC GTCTCGATAC AGCAATTGAG GTTGATTATT ACCGCGCGGG CGGTGTACTC ACTTATGTGC TTAACCGCAT AGTTTCTAAA GGATAA
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Protein sequence | MSGNKINIDA KNTFTVNGQV YSYYAINKGE LAGNDSITRL PVSIKVLLEN LLRHQQDNGG SRKEIEALAS SQGRGSTTEI NYQPARVLMQ DFTGVPAVVD LAAMRNALVK QGLDPQKINP LAKVDLVIDH SVNVDKFSSK SAFDENVAIE MARNKERYEF LKWGKQAFEN FSVVPPGTGI CHQVNLEYLA KVVWSETTEN ESLVYPDTLV GTDSHTTMIN ALGVLGWGVG GIEAEAVMLG QPISMQIPDV VGFELTGRLA EGITATDLVL QVVQMLRKHG VVGKFVEFYG AGLAHLPLAD RATIANMAPE YGATCGFFPV DQQTLNYLQL TGRDKQTIDL VESYSKLQGL WRDETTPKAD FSDTLLLDMS DIEPNLAGPD RPQDRVPMRQ LKTATDDFID LNGKGQQKTT DFPINDSDQS LHHGSLVIAA ITSCTNTSNP AVMLAAGLLA KKALAKGLVK QPWVKTSLAP GSRVVTDYLV ETGLQQSLNT LGFNLVGYGC TTCIGNSGPL PKPVQECIEE NDLIVSAVLS GNRNFAGRIH PQVKASWLAS PPLVVAYSLA GTTRIDLSQD PIGTGSDGEK VYLKDIWPSN AEITELLKSV SHQMFEKRYS AVFDGDKEWQ AIQSGEEANY QFSDESTYIQ KPPFFEPQYR DNFSNIVDAP ILVMLGDSVT TDHISPAGAI PKDSPAAQFL RNHGIDEKDF NSYGSRRGNH EIMMRGTFGN IRIRNEMTPD KEGGYTHLQG QSQAMFIFDA AMRYQQEKRS SVVIAGKEYG MGSSRDWAAK GTLLLGAKAV IAESFERIHR ANLAGMGVLP LQFMAGEDRK SLQLTGDESF DIMGLEGEMN ANQTLDAVIH YPSGKQRKIQ LLSRLDTAIE VDYYRAGGVL TYVLNRIVSK G
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