Gene Ping_2119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2119 
Symbol 
ID4623976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2578659 
End bp2579198 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID639797261 
Productisochorismatase hydrolase 
Protein accessionYP_943463 
Protein GI119945783 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.123592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA AAGAAAATAC CGGTCTTATT ATAATCGATA TACAAGGGAA ACTGGCTGGT 
TTAGTCCACG ATAGTGACGC TTTGATTTCA AATTGTAAAA AACTCATCAA AGGCGCTCAA
GCGCTTGATT TACCGATAAT ATGGCTTGAA CAAAACCCTG ACAAACTGGG CTCAACCGTT
GAGGAACTTA GTTCCCTGCT TAAGATGCAA CAGCCAATCG CCAAGTTTAC CTTTGATGCC
TGTGCAGAGC CCCAATTTAT GGATGCTGTC CGCAGCGCGA ATGTAGATAC ATGGCTTGTT
TGTGGCATTG AGGCACATAT TTGTGTTTAC CAAACCGCAT TAAATCTAAA GCGTACAGGT
GTTGAAGTGC AATTGGTTTG TGACTGTATT TCTTCACGTA CGCTTGCCAA TAAAAATCTG
GCAGTCAGTA AACTGCTTAA CCATGGCATT GATCTAACGG GATTGGAAAT GTGCCTGTAT
GAACTGCTTA AGGATTGTCG AGCGACAGAG TTTAAAGAGA TACTGAGTTT AATTAAGTAG
 
Protein sequence
MLKKENTGLI IIDIQGKLAG LVHDSDALIS NCKKLIKGAQ ALDLPIIWLE QNPDKLGSTV 
EELSSLLKMQ QPIAKFTFDA CAEPQFMDAV RSANVDTWLV CGIEAHICVY QTALNLKRTG
VEVQLVCDCI SSRTLANKNL AVSKLLNHGI DLTGLEMCLY ELLKDCRATE FKEILSLIK