Gene Ping_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2118 
Symbol 
ID4623975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2577630 
End bp2578310 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content38% 
IMG OID639797260 
Producttranscriptional regulator 
Protein accessionYP_943462 
Protein GI119945782 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.206974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AAAAGCCTGT GCTTGGTTTT GAAGGTGTCG ATGTTTCTCT TGCAGGGTCT 
GCCTCAAGTA TTGTGTTCGA AACATTAAGA CAAGCAATTA TTGAAGGGAA ATTACCCGAC
GGAACTCCTC TTCGCCAAGA AGAGCTCGCT AAGAAGTTTA ATACTAGTCG CATACCCATT
AGAGAGACGA TTGCACGTTT AGAACAAGAA GGTTTTGTAG AGACAATTCG CTATAAAGGA
GCCATAGTGA CAGCTATTTC TTATAAAGAA GTTGAAGAGA TGTTTGATCT CAGAGCTATT
ATAGAAGGCG AAATTATCTA TAAGGCTGTC CCTAAGATAG ACTCTGCCAC CTTAAAAAAA
GCAGAATCAT TTTGCGAAAA ATTTGCAGCA TCAAAGACGC CTGAAGAATG GACTAAGTAT
AATCGTCTAT TTCACTGCAC ACTTTACGAT GCAGCCAACT TAGATTTTCA TATGTCTATC
ATTCATTCAA TTCTAGACCG AACGGAGAGA TACTTAAGGG CGCAACTTGT TCTATCTGAT
GGTATGAACC GAGCAATCAA TGAACACCAA AAATTACTTG AATTTTGTCG TGATAAAAAT
GCGCTAGCAG CTAAATCTAT CACCCTCGAA CACATACAAC ATGCCAAACG CTCTCTGCTA
AAATTTTTAA ATGAAAAATA A
 
Protein sequence
MEKKKPVLGF EGVDVSLAGS ASSIVFETLR QAIIEGKLPD GTPLRQEELA KKFNTSRIPI 
RETIARLEQE GFVETIRYKG AIVTAISYKE VEEMFDLRAI IEGEIIYKAV PKIDSATLKK
AESFCEKFAA SKTPEEWTKY NRLFHCTLYD AANLDFHMSI IHSILDRTER YLRAQLVLSD
GMNRAINEHQ KLLEFCRDKN ALAAKSITLE HIQHAKRSLL KFLNEK