Gene Ping_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2116 
Symbol 
ID4626695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2575306 
End bp2576325 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content45% 
IMG OID639797258 
Productmalate/L-lactate dehydrogenase 
Protein accessionYP_943460 
Protein GI119945780 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.251445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATT TGACTATTAA CCTCACCCTT GAAGAAATAT ACGACCTAGC GAAAACAGCG 
TTGTTGAGTC AGGGCGCCAA TGAGGAAAAT GCAGCTGCGA TCGCAAATAC GGTCACTATT
GCCGAGAGAG ACGGAGCAAT TTCTCACGGG CTTTTTCGAA TTCCTGGCTA TATTGTTGGG
CTTCAAAGCA AAAAGGTTGT TGGCACAGCA ACGCCTGAAA TTGAAGAAGT CACACCTATT
ATATTTCGAT GTGACGCTAA AAATGGTTAT GCACCACTTA CACACGAACA TTGCTTACCA
CCATTGATTG ATGCCGCTAA AAAATTCGGA CTTGCTGCGG TCGCAATTCA GAATTCACAT
CATTTTGCAG CACTTTGGCC TGAAGTTGAA AAAATGAGTG AAGCGGGCTT AATTGGCCTT
ACTACTGTTT CTTATCTTCC ATGGGTTGCA CCAGCTGGTG GCAAAACGCC GATTTTTGGA
ACCAACCCGA TGGCCTTTTC GTGGCCTCGT GCCGGTAAAA ATCCGGTTGT GATCGATATG
GCAACGTCGT CAATGGCTAT GGGTGAAGTC ATGATAGCCG CCCGAGATGG CTATGAAGTG
CCACTGGGCA CAGGATTATC TGAATCAGGT GAATTAACAA CTGATGCCGC CGAAATTGTG
AAAGGCGTTC TATTACCTTT TGGTGGACAC AAAGGGTCTG CATTAGCATT AATGGTGGAA
TTACTCTCTG GTCCGCTAGT AGGGGAAACC TTTTCCTATG AAACTCAGGA ACGTGACAAG
GCAGAAGAAG GACCGGCAAG AGGAGGTCAA TTTATTCTAG CCATTTCACC AGATATTCTA
TCAGGAAAAA ATACCAGCGA ACAAACGGAT CGTTTTTTTG AAAAGTATGA TGCAATAGAA
GGTGCACGGA CCCCCGGTGC CAGACGGCAT AAAAATAGAG AAAATAGCGG TCCACGGTCA
GTTAACGCAG ATCTGGTAAA GACTATTGAG CAGCTTCGAA CGGATGGTTT AATAACCTAA
 
Protein sequence
MSHLTINLTL EEIYDLAKTA LLSQGANEEN AAAIANTVTI AERDGAISHG LFRIPGYIVG 
LQSKKVVGTA TPEIEEVTPI IFRCDAKNGY APLTHEHCLP PLIDAAKKFG LAAVAIQNSH
HFAALWPEVE KMSEAGLIGL TTVSYLPWVA PAGGKTPIFG TNPMAFSWPR AGKNPVVIDM
ATSSMAMGEV MIAARDGYEV PLGTGLSESG ELTTDAAEIV KGVLLPFGGH KGSALALMVE
LLSGPLVGET FSYETQERDK AEEGPARGGQ FILAISPDIL SGKNTSEQTD RFFEKYDAIE
GARTPGARRH KNRENSGPRS VNADLVKTIE QLRTDGLIT