Gene Ping_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2099 
Symbol 
ID4626678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2554974 
End bp2555849 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content42% 
IMG OID639797244 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_943446 
Protein GI119945766 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.83958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC CTAAAGTTCT ATTTAATTAT ATTGGTCATC TACCAGAGTG CCCAACATGG 
GATGCAACCA CCCATTCGCT ACTGTGGACA GATATTATCG AACAACAAGT ACATCGTTTT
TTTCCTGAAT CAGAAAAACA CACTGTGATT TCCTTTAACG AAGAAGTGGG TTGCTTTGCA
CTAAGAGAAA AAGGAGGCTT TATCTTAGCA ATGCGCACCG GCATTTTCTT GACAAATGAG
CAGGGTGAAG TTGAGTCTCG CGTTTGTGAA AACCCCAACA ACCCACTTTT AGCCCGCTTT
AATGATGGTG GTGTTGATCA GGATGGGCGC TTTTATGCGG GTACGTATTG GGAACCGAAA
ACATTTAATG GAGCACTACT GTTACGCATC GATTCAGACC TAAGACCAAA GGTTATTCAA
AACGATATTT TATGTGCAAA TGGTTTGGCA TTTAGTCCTG ATAAACAGTG GATGTACACC
TCTGATACGC CTAATCATGT TATCTATCGA ACACCAATGA CCGAAAATGG TGAATTAGGT
CTACGTGAAA TATTCAAGAC ATTCCCCATA GGGAAAGGCT GCCCCGATGG AGCCGCTGTT
GATGTTGAAG GTTGTTATTG GACGGCAATG TTTGACGGCC ACCGTATTGC ACGCATTAGC
CCGACGGGAG AAGTATTAGA AGAGCATGAA CTTCCTGTTC GCTGCCCAAC AATGGTTTGT
TTTGGTAGTG ACGATATGAA AACACTTTAT ATCACGACTA CACGTGAAAA TATGGAGGAA
ATAGAACTCG CTGAACGTCC TTTATCGGGT GCTTTATTTT CTATCCGCAC AGCAGTTGCG
GGGATGATTA AGCCTAATTT TAAAGAGGAA AAGTAA
 
Protein sequence
MNKPKVLFNY IGHLPECPTW DATTHSLLWT DIIEQQVHRF FPESEKHTVI SFNEEVGCFA 
LREKGGFILA MRTGIFLTNE QGEVESRVCE NPNNPLLARF NDGGVDQDGR FYAGTYWEPK
TFNGALLLRI DSDLRPKVIQ NDILCANGLA FSPDKQWMYT SDTPNHVIYR TPMTENGELG
LREIFKTFPI GKGCPDGAAV DVEGCYWTAM FDGHRIARIS PTGEVLEEHE LPVRCPTMVC
FGSDDMKTLY ITTTRENMEE IELAERPLSG ALFSIRTAVA GMIKPNFKEE K