Gene Ping_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2091 
Symbol 
ID4627013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2546579 
End bp2547346 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content44% 
IMG OID639797236 
Producttranscriptional regulator for glycerol-3-phosphate regulon, DeoR family protein 
Protein accessionYP_943438 
Protein GI119945758 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.402704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAC TCAGTCTTCG TCAACAGACA ATAATAGATA TGATTGGTCA TCAAGAGTAT 
TGCTCTATTG ATGAACTCGC TCAACATTTT AATGTCACCA CACAAACTAT CCGCCGAGAT
ATCAATCAAC TCTGTGCGAT AGGACTCGCA TGTCGCCATC ACGGTGGTGT TGGTTTACCT
GTCACTTTAG CCAACCGCAG TTATGTTTCC CGAAAAGTGA CTAATCAAGC AGAAAAGCAG
CATATTGCAG CATCTGTTGT TGCCGCGATC CCTAATGGTT GTACCTTATT TCTGGGGATA
GGCACTACGA TCGCGGGCAT CGCAGAAAAG CTGGTCAATC ATAGCGAGCT TAGGGTCGTC
ACCAATAACT TTGAAGCTGC TCATCTGTTA TCACAATTTG ATAATATCGA AACCTGGATC
CCGGGAGGGC GTATTCGAAG TAATGATCGC GATGTTGTTG GAGACAGCAT CGGAGCGTTT
TATGGTCAGT TTATTGCCGA TATTGGTATT ATCAGTTGTG GATCAATCAA TCCTATCGAA
AAACCCGTCG CGTTAAACAG TTTGGCAGTA CAATCCGAGG GTGAGATGCA GGAATATGCT
TTTGAATATG AACTGCGCGA AGCCATTGTC AGCCAAGCCA TTATTTCGGG TTCCAGGCAA
AAGTGGCTGG TGGCAAACAG TGCAAAACGG CAACAAAAAG CCAATGCCAA AGTTGCCCCT
CTAAGTCATT TTGATCGTGT ATTTGGTGGT GTTACAGATA AAAATTGA
 
Protein sequence
MQKLSLRQQT IIDMIGHQEY CSIDELAQHF NVTTQTIRRD INQLCAIGLA CRHHGGVGLP 
VTLANRSYVS RKVTNQAEKQ HIAASVVAAI PNGCTLFLGI GTTIAGIAEK LVNHSELRVV
TNNFEAAHLL SQFDNIETWI PGGRIRSNDR DVVGDSIGAF YGQFIADIGI ISCGSINPIE
KPVALNSLAV QSEGEMQEYA FEYELREAIV SQAIISGSRQ KWLVANSAKR QQKANAKVAP
LSHFDRVFGG VTDKN