Gene Ping_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2089 
Symbol 
ID4627011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2543848 
End bp2544348 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content40% 
IMG OID639797235 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_943437 
Protein GI119945757 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.315323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.408005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTC GCAGAATAAA GTATTCAGAT TTAAGTGGCT TTGTGAACCT ATGGCAGGGT 
GTTTTTAAGG AGGGTAAATA TTTAAGCACC CCACCTCCAC CTGCAGGGGG CATAGGCGCA
GTTTTACAAA AAGTTGAAGT GCATAAAATC CCACAGTTTG TTGCTATTGT TGAAAATGAA
TTAGTCGCTA GTGCTGAAGC ATTTCCTGGC GATATGTGTG GGCTTAAAGG AGACAATACT
TCACAAATTG GTGTAGTTGG CGCGCATGTA AGGCAGAGTA TGCGTGGCCA AGGTATTGGG
CGCTCCCTGT TAAAAATACT TATCGCTGAT AGTAAGAGAT ATGGTTATTC AAAGTTAATA
CTTGAGGTTT ACGAATCTAA TAAGCCAGCT AAAAAATTCT ATGAGTCATT TGGTTTTATT
GATAACGGCT TTGGCCGCGA TGTCATTTTT CCCTCGGGTC TAAAAGTACG CAGTGAAAGA
ATGTATTTGT TGTTAGGATA A
 
Protein sequence
MEIRRIKYSD LSGFVNLWQG VFKEGKYLST PPPPAGGIGA VLQKVEVHKI PQFVAIVENE 
LVASAEAFPG DMCGLKGDNT SQIGVVGAHV RQSMRGQGIG RSLLKILIAD SKRYGYSKLI
LEVYESNKPA KKFYESFGFI DNGFGRDVIF PSGLKVRSER MYLLLG