Gene Ping_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2087 
Symbol 
ID4627009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2538886 
End bp2539770 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content44% 
IMG OID639797233 
Productalpha/beta hydrolase fold 
Protein accessionYP_943435 
Protein GI119945755 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.416647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTTG AAGATCAATT TACTAAGACA ACAGTGAAGA CAACGGGCGC GCAAATCAAT 
GTGCTACAGG GGGGATCGGG TGCGCCATTA TTGCTTTTAC ATGGTTACCC GCAAACTCAT
GTTATGTGGC ACGAGATTGC GCCATCTCTT ATGCAACATT TTCATTTAAT TTGTCCGGAT
CTTAGAGGAT ATGGTGATAG TTCAAAGCCC TTTGGCAGTG CAGATCACGC CACTTATTCT
AAGCGTGAGA TGGCTAAAGA TATGATCGAG GTGATGGAAA GCCTAGGATA TAGTGAGTTT
TTTGTCGCGG GTCATGACCG TGGTGCTCGC GTTGTCCACC GTATGGCATT AGACTATCCT
GAAAAAATCA AGAAAGCCTG TGTGATGGAT ATTGTTCCCA CGCATCACAT GTTTAAAACG
ACTGATCAGC AATTTGCGAC GGGTTACTAC CACTGGTATT TTCTTATTCA ACCGGACAAT
CTCCCTGAAC GTATGATTGG CGCTGATCCG GCTTACTATT TGGGTGAAAG TCTAAAAAGA
TGGAGTGCTT CGGGCGCCGT ATTTAAAAAA GAAGCCGTTG ATGAATATAT ACGCTGTTTT
AGCAGCGCAG AAACAATTCA TGCTTCCTGC GAAGATTACC GTGCTGCTGC AAGCATTGAC
CTAAAGCATG ATCAACAAGA CATGAGTCAA AAAATGCTCT CTCCTTTGCT AGTTCTGTGG
GGAGCCGAGG GATTTATTGA GCGTAATTAT AATGTGCTGG ATGTATGGCG AGAACATGCT
GTAGATGTAC AAGGGAAAAG CTTGCAGTGT GGACACTTCT TGGCAGAAGA GGCACCCTTG
GCAGTTTGTG AAGAACTGCT TCGATTTTTT GACTATCCAA AATAA
 
Protein sequence
MIFEDQFTKT TVKTTGAQIN VLQGGSGAPL LLLHGYPQTH VMWHEIAPSL MQHFHLICPD 
LRGYGDSSKP FGSADHATYS KREMAKDMIE VMESLGYSEF FVAGHDRGAR VVHRMALDYP
EKIKKACVMD IVPTHHMFKT TDQQFATGYY HWYFLIQPDN LPERMIGADP AYYLGESLKR
WSASGAVFKK EAVDEYIRCF SSAETIHASC EDYRAAASID LKHDQQDMSQ KMLSPLLVLW
GAEGFIERNY NVLDVWREHA VDVQGKSLQC GHFLAEEAPL AVCEELLRFF DYPK