Gene Ping_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2084 
Symbol 
ID4627006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2534042 
End bp2535169 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content44% 
IMG OID639797231 
Productalanine racemase 
Protein accessionYP_943433 
Protein GI119945753 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.261095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTATA AAAACACGCA TTTAACCAGA GCAATTATAC ATCTCGACCA CCTGACTCAT 
AATATGAAGG TGCTGCAAAA AAAGGCCGGT AAGCGGCCAC TTTTCCCCGC TATTAAGGCT
AATGCCTACG GTCATGATGC AGAGATTATT GCAAAACATC TGATCAGTCT TGGCTACACC
ACCTTATGCA CCGCGCATCT AAGTGAGGCT GCAGAGCTTG TCGAAAAAGG GGTTAACGCT
ACATTTATCA TCCTGTCACC CACGCTTGCT GAAAACAGCG ACTATCTCCT TGACTATGAT
TTTCAACCGA TAGTTTCTAG CCAGGTGCAA TTACAAGCGC TTGCCCAAGC AGCAAGAAGA
AGAGATAAAC AAATAACCAT ACACGTCAAA GTAGATACCG GAATGGGCCG CATGGGTGTC
AGACCCGACC AGCTACTGAT GTTTCTTGAT GAGTGTAAAG CCCAACCTGA AATTATTATT
GGAGGAGTCT GCAGCCATTT CCCCCGCGCT GATGAAAACA ATTTATCTTT TTCAAAAACA
CAGATCAATA CTTTCACTGC GCTAAAGAAA GAAACCAAAG CGTATAATAT TCCTCTCTAT
CATATTGCCA ACAGTGCAGC CCTGTTTGCG TTAGAAGAAG CACACCTTGA TGCAATTCGT
CCAGGTATAT CAATCTATGG TCTAAAGCCA TCTGTCTCTA TGGTTGTCCC GGAGTTAAAC
GATCTTAAGC CGATAATGTC TCTTGTAAGC CGGATAACGC TGCTCAAGGA AGTCGTTCAA
GATACCGGAA TCAGTTATGG CCACCTGCAC TACACCGATA AACCCTCTCT TATCGCCACT
ATTCCCATTG GATATGGTGA TGGTTTGAGC AGGTCGCTGA GCAACAGAAT TGAAGTTTTA
ATTGGTAACG AGCGATGCAG GCAGATTGGG AATATCTGTA TGGATCAGTG CATGATTGAT
GTGACGCAAC TTCGGGGTAA AGTCTCAATA GGGGACGAGG TTGTTATTAT CGGAACTCAG
GGCAGTGAAA CCATAACAGC CGATGATCTC GCAAAAAAAC AGCACACAGT AAATTATGAG
ATAGTCACTG CGATCTCCAG TCGAGTGCCA AGAATAGTCG CTCAATGA
 
Protein sequence
MNYKNTHLTR AIIHLDHLTH NMKVLQKKAG KRPLFPAIKA NAYGHDAEII AKHLISLGYT 
TLCTAHLSEA AELVEKGVNA TFIILSPTLA ENSDYLLDYD FQPIVSSQVQ LQALAQAARR
RDKQITIHVK VDTGMGRMGV RPDQLLMFLD ECKAQPEIII GGVCSHFPRA DENNLSFSKT
QINTFTALKK ETKAYNIPLY HIANSAALFA LEEAHLDAIR PGISIYGLKP SVSMVVPELN
DLKPIMSLVS RITLLKEVVQ DTGISYGHLH YTDKPSLIAT IPIGYGDGLS RSLSNRIEVL
IGNERCRQIG NICMDQCMID VTQLRGKVSI GDEVVIIGTQ GSETITADDL AKKQHTVNYE
IVTAISSRVP RIVAQ