| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2073 |
|---|
| Symbol | |
|---|
| ID | 4624676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2522746 |
|---|
| End bp | 2523678 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639797221 |
|---|
| Product | substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_943423 |
|---|
| Protein GI | 119945743 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.251042 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.729322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA AAAAAATACT CACCATGCTG GCGGCTACCG TCGCGTTAAC AGCAAATGCT
GCGGATCAAC AATGCGAGAC AGTTCGTTTT TCTGATGTGG GTTGGACAGA CATCACCTCA
ACGACCGCTA TCACTTCTAC CCTATTACAA GGGATGGGTT ATAAAACGGA TACGCAGTTG
TTGTCTGTAC CCGTGACTTA TAAGTCAATA GAAAATGGCG ACATTGATGT ATTTCTTGGC
AATTGGATGC CAACAATGAA AGGTGATATT CAATCTTATA CTGATGCAGG CACCGTTGAA
ACAATTCACA AAAACTTATC AGGTGCGAAA TACACCTTAG CGGTACCACA GTATGTTTAT
GATGCTGGGG TTCAAAACTT TGCTGATCTT GCTAAGTTTG CTGATAAATT TGACAGCGAA
ATCTATGGCA TTGAACCTGG TAATGATGGT AACCGTTTAA TCCAGGACAT GATCGCTAAA
GATGCCTTTG GTCTAAAGGA CTTTGAATTA GTCGAGTCCA GCGAAGCGGG TATGTTGTCG
CAAGTTAAAC GTGCAACACG TCGAAATAAC TGGGTAGTCT TTTTAGGTTG GGCACCACAC
CCAATGAATG CAAATTTTGA TCTTGCTTAT TTAGCCGGCG GCGATGATTT TTTTGGTCCT
GACTTTGGTG GAGCAAGTGT CTACACCAAT GTTCGTAAAG GTTACACACA AGCATGTCCT
AATGTGGGCA CATTGTTAAC CAATCTTACC TTTACTCTGG CAGCTGAAAA CGAAGTAATG
GCTGCTATTT TAAATGAGGG CAAAAAGCCG GAAGACGCTG CAACAGCTTG GCTTAAAAAT
AATCCGTCTG TTTTGAATGC ATGGTTGACA GGTGTTAAAA CTATCGATGG TAAGCCTGCT
TTACCGGCCG TCAAAGCATA TTTAAAGCTT TAA
|
|---|
| Protein sequence | MKLKKILTML AATVALTANA ADQQCETVRF SDVGWTDITS TTAITSTLLQ GMGYKTDTQL
LSVPVTYKSI ENGDIDVFLG NWMPTMKGDI QSYTDAGTVE TIHKNLSGAK YTLAVPQYVY
DAGVQNFADL AKFADKFDSE IYGIEPGNDG NRLIQDMIAK DAFGLKDFEL VESSEAGMLS
QVKRATRRNN WVVFLGWAPH PMNANFDLAY LAGGDDFFGP DFGGASVYTN VRKGYTQACP
NVGTLLTNLT FTLAAENEVM AAILNEGKKP EDAATAWLKN NPSVLNAWLT GVKTIDGKPA
LPAVKAYLKL
|
|---|
| |