| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2071 |
|---|
| Symbol | |
|---|
| ID | 4624674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2519425 |
|---|
| End bp | 2520891 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639797219 |
|---|
| Product | betaine aldehyde dehydrogenase |
|---|
| Protein accession | YP_943421 |
|---|
| Protein GI | 119945741 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.83958 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCAT TAGTCGTTTA TCAAAATTAT ATCCACGGTC AATATATCCC CAATGACACA
GGTGAAACAT TTGAAGTAAT TAACCCTGCG ACGGGTCAGG TTAGCTATTT AGTTGAAACA
GCCGATCAAG CCGTTCAGCA GGCCGCAATC GAGAGCGCCA AATCTGGTTT TGCCACATGG
TCAAAAATGA CCCCGATCGA GCGCAGCCGT ATTCTGCTTA AGGCTGTGGC ATTATTGCGT
GAACACAATG ACGAACTTGC CGTGGGTGAA GTACTTGATA CCGGCAAACC ATGGCAGGAA
GCATCGGTTG TTGATGTCGT TACAGGCACC GATACCATTG AATTTTTTGC AGGCCTTGCC
CCAAGTATTG AAGGTAATCA GCAGCAGGTC GGTGATGATT TTTATTACAC TCGCCGTGAA
CCTCTCGGCA TTTGTGCCGG CATCGGCGCA TGGAACTATC CTCTGCAGAT TGCCTGTTGG
AAAGCCGCAC CAGCCTTAGC TTGCGGTAAT GTAATGATTT TTAAACCATC GGAAGAAACA
CCACGCGGTG CAATGCGTTT AGCCGAAATA TTCACCTTGG CGGGTGTCCC AGATGGTGTG
TTTAACGTGG TTCAAGGCGA TGGCCGTGTT GGTGCTTGGT TAACCGGCCA TGAAGATATA
GCCAAAGTAT CATTTACCGG TGAAGTCGGT ACAGGCAAAA AAGTAATGGC AGCGGCGGCT
GGTTCACTAA AAGCTGTCAC CATGGAATTA GGCGGTAAAT CACCGCTGAT TATTTTTAAT
GATGCCGATC TGGAAAATGC AGTCTCTGCT GCCATGTTGG GCAATTTCTA TACGCAGGGC
GAAGTCTGTA CAAACGGCAC CCGCGTATTT GTTCAGGAAG AGATTTACCC GCGTTTTATT
AAGCGTCTGG TTGAGCGTAC AGAGCAAAAT ATTATCTGCG GCGATCCGAT GGATCCTGAG
ACCAACTTTG GTCCTCTTAT TTCCAAGGAC CACCAGCAAA AAGTACTCGA CTATATAACG
ATAGGTAAAG CTGAAGGCGC CACCCTGCTT ACTGGCGGTA AAAAATTACA CCCTGAAAAT
GCACCGGATG GTTACTTTGT TGCACCGACT ATTTTCACTG ACTGCACCGA CGAAATGACC
TTGACTAAAG AAGAAATATT TGGCCCGGTT ATGTCTGTCC TGACCTTCAG CGATGAAGAC
GAAGTTGTTC GCCGCGCAAA TGATACCCGC TTAGGATTAG CAGCAGGCCT GTTTACTCAG
GATATTACCC GGGCTCACCG AGTGATACAT CAGATTGATG CCGGCATTTG CTGGATTAAT
AGTTTTGGCG CATCACCCGC TGAAATGCCG GTGGGTGGCT ATAAAATGTC AGGTGTCGGC
CGCGAAAATG GCAGCGAAAC ACTTAAATCC TATACTCAGA TCAAAGCGGT CTATATCGGT
ATGCAGCCAC TTGACAGCCC GTTTTAA
|
|---|
| Protein sequence | MSSLVVYQNY IHGQYIPNDT GETFEVINPA TGQVSYLVET ADQAVQQAAI ESAKSGFATW
SKMTPIERSR ILLKAVALLR EHNDELAVGE VLDTGKPWQE ASVVDVVTGT DTIEFFAGLA
PSIEGNQQQV GDDFYYTRRE PLGICAGIGA WNYPLQIACW KAAPALACGN VMIFKPSEET
PRGAMRLAEI FTLAGVPDGV FNVVQGDGRV GAWLTGHEDI AKVSFTGEVG TGKKVMAAAA
GSLKAVTMEL GGKSPLIIFN DADLENAVSA AMLGNFYTQG EVCTNGTRVF VQEEIYPRFI
KRLVERTEQN IICGDPMDPE TNFGPLISKD HQQKVLDYIT IGKAEGATLL TGGKKLHPEN
APDGYFVAPT IFTDCTDEMT LTKEEIFGPV MSVLTFSDED EVVRRANDTR LGLAAGLFTQ
DITRAHRVIH QIDAGICWIN SFGASPAEMP VGGYKMSGVG RENGSETLKS YTQIKAVYIG
MQPLDSPF
|
|---|
| |