| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2062 |
|---|
| Symbol | |
|---|
| ID | 4624701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2511277 |
|---|
| End bp | 2512878 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639797211 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_943413 |
|---|
| Protein GI | 119945733 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.413153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.465678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTTA ACCATCTTAA ATTTGATAAC CGCCTTCGAA ATAATCTACC TGCTGATAGC
GAAACCGACA ATTATTGCCG CAGCGTAGAA AATGCAGCCT ATTCATTGGT CTCCCCGGTA
AAAGCAACAG CGCCAAAATT AGTTGCGGTT AGCAATTTAT TGGCAGAACA ATTAGGTTTT
ACCACTGAAG CCTTAAACAG CCCTGAATTT CCTCAAGCCA TGACGGGCAA TCTATTGCTC
GATGGGATGC AGCCCTATGC GCTTTGTTAT GGTGGTCATC AGTTTGGTCA ATGGGCCGGG
CAATTAGGGG ATGGACGGGC AATCAACCTG GGCGAATTAG TCACGACAAA TTTAGGTCAC
CAAACACTGC AGCTAAAGGG CGCCGGTCCA ACCCCCTACT CTCGCCGGGC TGACGGTATG
GCCGTACTGC GCTCCTCTAT TCGTGAGTTT TTGTGCTCCG AGGCGATGTT TCATTTAGGT
ATTTCAACGA CACGCGCTTT GAGTTTATGC TTAACGGGCG ATCAAGTTGT CCGGGATATG
ATGTATGACG GTAATGCAGC ATTAGAGCCT ACCGCAATAG TGTGCCGCGT ATCTTCTTCT
TTTTTACGTT TTGGTAGTTT TCAACTGCCC GCCTCCCGGG GCGATGAACA ACTTTTAATA
CAGCTTGTAC AGCATTGTAT TAAGTCTGAT TATCCTCATT TAGCGCCCGC TTCCGGGGTA
TTTGATCAGC AAGTCTACCT TGCGTGGTTT AAAGAAATCT GCGAGCGTAC CTGTGATACA
GTAGTTAATT GGATGCGGGT TGGTTTTGTA CATGGGGTAA TGAATACCGA CAATATGTCC
ATTATGGGTG AAACCATCGA TTATGGTCCC TATGGCTGGA TTGACGATTT TGATCTTAAT
TGGACACCGA ACACCACAGA TGAAGGGCAA AAACGCTATC GTTTTGGCGG ACAGGGAGAA
ATTAGTCAGT GGAACTTATT TCAGTTAGCC AATGCTATTT TTCCATTAAT AGGAGAAGCT
GAGCCATTAC AAAAAATATT AAATGAATAT GGCACAGATT ATCAGCGTAA ATGGTGCGAT
ATGATGGCGG AAAAATTAGG CTTTAAACAC TATCGGGGTG AAACTGATTT AGCGCTGTTT
AAATCCTTAG AAAAATTATT GGGTGCAGTG GAAACAGATA TGACCCTCTT TTACCGTTTA
CTTGCAAATA TTCCCAATGA TTTAGATACG CAAACAGCAA CCCAATGGAT GGCAAAATTA
GGCCCATGCT ATTACAGTCT GCTCGATCTT AACGATCAGT ATATTAAAGA CTTGACGAAG
TGGTTAGCGT CTTATCTTGA GCGAGTTAAC CTTGATGGTT TAAGTCAAGA ACTGCGTGCA
ACAGCCATGA ATAAAGTCAA TCCTAAATAT GTTATTCGTA ATTACCTTGC GCAGCACGCT
ATCGAATTGG CTGAAAAGGG TGATTTCAGC GAAATAGCTA CACTGCAGAA AATATTACAA
AACCCCTATG ATGATCAACC TGAGCATAAC AGTTATGCTC AGAAGCGTCC GGATTGGGCA
CGGGATAAAG CCGGTTGTTC GATGTTATCC TGCAGTTCAT AA
|
|---|
| Protein sequence | MPFNHLKFDN RLRNNLPADS ETDNYCRSVE NAAYSLVSPV KATAPKLVAV SNLLAEQLGF
TTEALNSPEF PQAMTGNLLL DGMQPYALCY GGHQFGQWAG QLGDGRAINL GELVTTNLGH
QTLQLKGAGP TPYSRRADGM AVLRSSIREF LCSEAMFHLG ISTTRALSLC LTGDQVVRDM
MYDGNAALEP TAIVCRVSSS FLRFGSFQLP ASRGDEQLLI QLVQHCIKSD YPHLAPASGV
FDQQVYLAWF KEICERTCDT VVNWMRVGFV HGVMNTDNMS IMGETIDYGP YGWIDDFDLN
WTPNTTDEGQ KRYRFGGQGE ISQWNLFQLA NAIFPLIGEA EPLQKILNEY GTDYQRKWCD
MMAEKLGFKH YRGETDLALF KSLEKLLGAV ETDMTLFYRL LANIPNDLDT QTATQWMAKL
GPCYYSLLDL NDQYIKDLTK WLASYLERVN LDGLSQELRA TAMNKVNPKY VIRNYLAQHA
IELAEKGDFS EIATLQKILQ NPYDDQPEHN SYAQKRPDWA RDKAGCSMLS CSS
|
|---|
| |