Gene Ping_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2058 
Symbol 
ID4624697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2505472 
End bp2506497 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content39% 
IMG OID639797208 
Producttranscriptional regulator of LacI family protein 
Protein accessionYP_943410 
Protein GI119945730 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.241657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGA CTCGTAAACG TCGCGGGACA GGACGTGTAA CATTAGCAGA TGTAGCAAAA 
GCAGCAGGCG TAGGAACGAT GACGGTATCT AGGGTATTAA GAATGCCCGA TCAGGTTTCC
GATAAACTAA GGGATAAAAT ACAGCAAGTT ATTGATGAAT TAGGTTATAT ACCTAATCGT
GCCGCAGGTG CATTAGCCTC TGGGAAAAGT AACTCGATTG CGGTGATCCT TCCCTCTTTA
GTTGATAAAA TGTGTTCTCA ATTTATCCCC CCATTTCAAA ATATACTCAA TCAGGCAGGT
CACCAACTAA TATTGGGTTA CAGCAATTAT TCAATTTCAC AAGAAGAGCA GTTACTTTCT
CCTTTATTAG CAAGCAACCC CTCTGCCATC GTGCTTTTCG GTAGCGAGCG ATCTGCCCAA
TCGACAAAAA TGATTAAAAA CGCTCAGCTT ACTATGCTTG AAGTGGCTGA AATAAATGAT
CTTTCCTTTG ATTTAAATAT TGGTATTGAT CATTATCAGG CAAGCAAAGA GATGACGAAT
TATTTAATTA AAAAAGGTTA TCAGAATATT GCTTTTGTCG GTTTCCAAAA CGGACAAAAT
ATTTTACGTA AGCAACTAGG TGGTTGGCAG TCAGCTATGC TGGAAAATTA CTTATCTCCA
GATCATTTTT TAATAGCCAA TGATCTTACT GATATAAAAT TAGGCAGTGA AGGGCTCGCT
AAATTATTAT TGCGGGAGAG TACGCTAGAT GCTGTTATCT GCACTAATGA AGAGATTGCA
ACAGGCGTGT TGTTTGAATG CCAACGACGT GTTCTTAAAA TTCCGCAAGA TATTGCTATA
ACATGTCTAG ATGGTTCAAT ACTCAGTCAG CAATGTGTAC CGACACTGAC CAGTATCGAG
CTTGACTACG TGAACATGGG TAAAGAAGCA GCCAATCTAT TACTGGAAAG ATTATTGGAT
AAAGAGCAGA GTGATGCTAA ACAAATTAAT ATCGGTTTTA AGCTTTGTGA ACGAGCAAGC
AGTTGA
 
Protein sequence
MEVTRKRRGT GRVTLADVAK AAGVGTMTVS RVLRMPDQVS DKLRDKIQQV IDELGYIPNR 
AAGALASGKS NSIAVILPSL VDKMCSQFIP PFQNILNQAG HQLILGYSNY SISQEEQLLS
PLLASNPSAI VLFGSERSAQ STKMIKNAQL TMLEVAEIND LSFDLNIGID HYQASKEMTN
YLIKKGYQNI AFVGFQNGQN ILRKQLGGWQ SAMLENYLSP DHFLIANDLT DIKLGSEGLA
KLLLRESTLD AVICTNEEIA TGVLFECQRR VLKIPQDIAI TCLDGSILSQ QCVPTLTSIE
LDYVNMGKEA ANLLLERLLD KEQSDAKQIN IGFKLCERAS S