Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2058 |
Symbol | |
ID | 4624697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2505472 |
End bp | 2506497 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639797208 |
Product | transcriptional regulator of LacI family protein |
Protein accession | YP_943410 |
Protein GI | 119945730 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.241657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGTGA CTCGTAAACG TCGCGGGACA GGACGTGTAA CATTAGCAGA TGTAGCAAAA GCAGCAGGCG TAGGAACGAT GACGGTATCT AGGGTATTAA GAATGCCCGA TCAGGTTTCC GATAAACTAA GGGATAAAAT ACAGCAAGTT ATTGATGAAT TAGGTTATAT ACCTAATCGT GCCGCAGGTG CATTAGCCTC TGGGAAAAGT AACTCGATTG CGGTGATCCT TCCCTCTTTA GTTGATAAAA TGTGTTCTCA ATTTATCCCC CCATTTCAAA ATATACTCAA TCAGGCAGGT CACCAACTAA TATTGGGTTA CAGCAATTAT TCAATTTCAC AAGAAGAGCA GTTACTTTCT CCTTTATTAG CAAGCAACCC CTCTGCCATC GTGCTTTTCG GTAGCGAGCG ATCTGCCCAA TCGACAAAAA TGATTAAAAA CGCTCAGCTT ACTATGCTTG AAGTGGCTGA AATAAATGAT CTTTCCTTTG ATTTAAATAT TGGTATTGAT CATTATCAGG CAAGCAAAGA GATGACGAAT TATTTAATTA AAAAAGGTTA TCAGAATATT GCTTTTGTCG GTTTCCAAAA CGGACAAAAT ATTTTACGTA AGCAACTAGG TGGTTGGCAG TCAGCTATGC TGGAAAATTA CTTATCTCCA GATCATTTTT TAATAGCCAA TGATCTTACT GATATAAAAT TAGGCAGTGA AGGGCTCGCT AAATTATTAT TGCGGGAGAG TACGCTAGAT GCTGTTATCT GCACTAATGA AGAGATTGCA ACAGGCGTGT TGTTTGAATG CCAACGACGT GTTCTTAAAA TTCCGCAAGA TATTGCTATA ACATGTCTAG ATGGTTCAAT ACTCAGTCAG CAATGTGTAC CGACACTGAC CAGTATCGAG CTTGACTACG TGAACATGGG TAAAGAAGCA GCCAATCTAT TACTGGAAAG ATTATTGGAT AAAGAGCAGA GTGATGCTAA ACAAATTAAT ATCGGTTTTA AGCTTTGTGA ACGAGCAAGC AGTTGA
|
Protein sequence | MEVTRKRRGT GRVTLADVAK AAGVGTMTVS RVLRMPDQVS DKLRDKIQQV IDELGYIPNR AAGALASGKS NSIAVILPSL VDKMCSQFIP PFQNILNQAG HQLILGYSNY SISQEEQLLS PLLASNPSAI VLFGSERSAQ STKMIKNAQL TMLEVAEIND LSFDLNIGID HYQASKEMTN YLIKKGYQNI AFVGFQNGQN ILRKQLGGWQ SAMLENYLSP DHFLIANDLT DIKLGSEGLA KLLLRESTLD AVICTNEEIA TGVLFECQRR VLKIPQDIAI TCLDGSILSQ QCVPTLTSIE LDYVNMGKEA ANLLLERLLD KEQSDAKQIN IGFKLCERAS S
|
| |