Gene Ping_2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2055 
SymbolulaA 
ID4624694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2503122 
End bp2504378 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content41% 
IMG OID639797205 
ProductPTS system ascorbate-specific transporter subunit IIC 
Protein accessionYP_943407 
Protein GI119945727 
COG category[S] Function unknown 
COG ID[COG3037] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.244888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTT TAAATTTTTT AATGGATGAT GTTTTGTCCA ACCCGGCAAT ACTGGTTGGT 
TTGATAGCGT TAATTGGTTT AGTTGCGCAG CGGAAATCAA TAACAGATTG TATTAAGGGT
ACCGTAAAAA CCATATTGGG TTTTGTTATT TTAGGTGCTG GTGCAGGCTT AGTTGTCAAT
TCATTAGGTG ATTTTGCGGT TATCTTCCAG TATGCATTCG ATATTACTGG TGTCGTGCCC
AATAATGAAG CGATCGTATC AATAGCCCAG GAAGCATTCG GTAAAGAGAT GGCCATGATC
ATGTTATTTG CTATGATCGT TAACATTTTA ATTGCCCGTT TTACGCCATG GAAATTCATC
TTTTTAACCG GGCATCACAC CCTGTTTATG TCGATGATGG TCGCTGCCAT TCTATCTACT
AGTGGCATGT CAGGTGTTCC TTTGGTCGCT TCAGGTTCGA TTCTTGTTGG TTCGTTAATG
GTATTTTTTC CTGCAATTGG ACATAAATAC ATGAAACAGG TAACCGGCTC TAATGATGTG
GCAATTGGTC ACTTTTCAAC ATTATCTTAT GTGTTGGCTG GTTTTATCGG CAGTAAATTT
GGTAATAAAG CGCATTCGAC TGAAGATATG GATGTTCCTA AGGGCTTGTT ATTCTTACGT
GATACACCAG TGGCAATCTC ATTCACCATG TTTATTATCT TTATCATTAC CTGTCTTTTT
GCCGGCGGTG ATTATGTTCG CGAAGTCAGC GGTGGTGACC ACTGGTTTAT GTTTTCATTA
ATGCAGTCAA TCAGTTTTGC TGCGGGTGTA TACGTCATCT TACAAGGTGT GCGAATGGTT
ATTTCTGAGA TTGTACCTGC TTTTAAAGGT ATTTCAGACA AACTTGTACC GAATGCTATT
CCTGCTCTTG ATTGCCCAGT CGTATTTCCT TACGCACCCA ATGCTGTTTT AGTCGGTTTC
TTATCAAGCT TTACAGCTGG TTTAGTCGGC ATGGTCCTGC TTTATCTGAT GGGACTGACG
ATGATCATTC CTGGGGTCGT ACCGCACTTT TTTGTTGGTG CAGCAGCGGG TGTCTTCGGC
AATGCAACTG GAGGACGACG CGGTGCTATA TTAGGTGCAT TTGCATCAGG TTTGTTAATT
ACTTTCTTAC CGGTATTCTT ATTGCCTGTG TTAGGTAATT TAGGGTTTGA AAACACCACC
TTTAGTGATG CAGACTTTGG TGTTGTCGGT ATTTTGCTTG GGCTTATAGT CAATTAA
 
Protein sequence
MEFLNFLMDD VLSNPAILVG LIALIGLVAQ RKSITDCIKG TVKTILGFVI LGAGAGLVVN 
SLGDFAVIFQ YAFDITGVVP NNEAIVSIAQ EAFGKEMAMI MLFAMIVNIL IARFTPWKFI
FLTGHHTLFM SMMVAAILST SGMSGVPLVA SGSILVGSLM VFFPAIGHKY MKQVTGSNDV
AIGHFSTLSY VLAGFIGSKF GNKAHSTEDM DVPKGLLFLR DTPVAISFTM FIIFIITCLF
AGGDYVREVS GGDHWFMFSL MQSISFAAGV YVILQGVRMV ISEIVPAFKG ISDKLVPNAI
PALDCPVVFP YAPNAVLVGF LSSFTAGLVG MVLLYLMGLT MIIPGVVPHF FVGAAAGVFG
NATGGRRGAI LGAFASGLLI TFLPVFLLPV LGNLGFENTT FSDADFGVVG ILLGLIVN