Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2054 |
Symbol | |
ID | 4624693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2502012 |
End bp | 2502971 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797204 |
Product | transaldolase B |
Protein accession | YP_943406 |
Protein GI | 119945726 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.4803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.221848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCTA AATTAGATGA ATTACGTAAA TTAACGACCG TTGTCGCTGA CACCGGGGAT ATCGAAGCAA TTCAAAAATA TACACCTCAA GATGCTACCA CTAACCCTTC ACTTATCTTA AAGGCTGCTC AAATTATTGA ATATGCACCT TTAATTGACA GTGCAATTCA GTATGCAAAA GCACAAAGTG GCGATCCCAA GCAGCAGGTG CAAGATGCCT GTGACATGTT AGCGGTTAAT ATTGGCAAAG AAATTTTAAA TATTGTACCG GGACGTATTT CAACTGAAGT TGATGCCCGT TTATCTTATA ACACCGAAGC AAGCCTTATT AAGGCGCGTC AGTTGATAAA AATGTATAAT GAGGCTGGAA TCAGTAACGA TCGCATTCTC ATTAAACTGG CATCAACCTG GCAGGGTATT AGAGCTGCTG AGATACTCGA AAAAGAGGGT ATAAATTGTA ATTTGACTCT TTTATTTTCT TTTGCTCAGG CACGTGCCTG TGCTGAAGCG GGGGTGTTTT TAATTTCTCC GTTTGTCGGC CGAATTATGG ATTGGCATAA AGCAAACGAA GGGCGTGACT TTACCCCAGA GACGGATCCG GGTGTGCTGT CTGTTTCAAA AATATATAAC TTCTACAAAG CAAACGATTA TAAAACAGTT GTTATGGGTG CAAGCTTCAG AAATATTGGT GAGATCTTAG CGCTTGCCGG CTGTGACCGA CTAACAATCA GCCCTGAATT ATTACAGCAA TTAGCAGATT CTGAGGGTGA GGTGGTTAGA AAATTATCGC CAGCGGCAAC TTCAGTCACC CCGTTGACTT TTCAGGCACC ATTAACCCAT GCTGAGTTCC TATGGGAGCA TAATCAGGAT CCTATGGCGG TTGATAAACT AGCCGAAGGT ATCCGTAATT TTGCAATTGA TCAGGATAAG CTGGAAAAAA TGATTGCAGA TCGTCTTTAA
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Protein sequence | MVSKLDELRK LTTVVADTGD IEAIQKYTPQ DATTNPSLIL KAAQIIEYAP LIDSAIQYAK AQSGDPKQQV QDACDMLAVN IGKEILNIVP GRISTEVDAR LSYNTEASLI KARQLIKMYN EAGISNDRIL IKLASTWQGI RAAEILEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG RIMDWHKANE GRDFTPETDP GVLSVSKIYN FYKANDYKTV VMGASFRNIG EILALAGCDR LTISPELLQQ LADSEGEVVR KLSPAATSVT PLTFQAPLTH AEFLWEHNQD PMAVDKLAEG IRNFAIDQDK LEKMIADRL
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