| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2051 |
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| Symbol | |
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| ID | 4624690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2497955 |
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| End bp | 2500066 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639797203 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_943405 |
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| Protein GI | 119945725 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.149643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0751648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG CGCTCCAATT AGAGCTGAAT GCCGAAAGAG AAAAAAACAA GTTATTGTTA
AATATTGTGA ACAGTATTCC AGAGCCCATT ATGGCCAAAA ATTGGGAGGG CAACTTTATT
TTCGCAAATA AAGGTATCGC TGAACTTTAT AGCACCTCTC CAGAGGAGAT GATTGGAAAA
GAAGACTCCT TTTTTACAGG CAATAAAGAA CAAGGTCAGT TTTTTAAAGA AAACGCCCAG
TCTATTATGC GACGCTTTGA GACTGAAATG GTCTACGAAG ATTCTACTAA TGCAAGGACA
GCGGAGATTC GCCATTACCA CTCCTTAAAA ATCCCTTTTA AAAACAACAA TGATGAACTA
AATATTGTCA TGTTTGCAAA AGATATTACT GAAATCACCG CGCTTAAAAA TACAGCAGAA
GCCAATGCCA AGCGTTTGGG ACATGTATTA GAGGTCTCCG GTGAGGGGAT GTGGGATTGG
AATATACAAA CCAATGAGGT GTTTCAGAAT CAAAAATGGG CAGACATCAC CGGCGTTAAA
CATTCAAAGA GATCGTTTTC AGAGTTTCAG GATTGTCTTG TTGAAGAAGA TAAAAAATAT
GTCCTTACCT CTCTTCAGGC GCTAATCGAA AAAAAAATTC CTTATGATAT TGAGTACAGA
TTTAGGCGCC CTGACGGTAA AGTGATATGG ATTTGGGATA GAGGGCAGGT TCTTGAGTAT
GATGATCAGG GCAAGCCGAA GTTATTGGTT GGGATCATGC AGGATATTAC AGAGAAAAAA
TTCAACCAGT CTGAAATCGA GTTAATGGCC TTTTATGATA CTTTAACCAT GCTTCCCAAC
CGTGCACTAT TGAATGATAG GTTAAACCTT GCGATTGAGC ATAGCAAACG TTTTGAAAAA
TATGGTGCAG TGCTGTTTCT CGATTTAGAT AACTTTAAAA TCTTAAATGA CTCTTATGGA
CACCAAGCGG GTGATGATTT ATTAGTGATC GTAGCACAAC GTATTCAATC GGTTATACGT
AAGGATGATA CTGTTGCTCG ATTTGGCGGC GATGAATTTG TGATTGTGCT TAATGAACTG
GATTCTGAGC CGGTCAAAGC GGCCATTAAG GCGCAACGTC TTGCTCAGAG CATTTGTCAT
TCAATCAAGC AAAAAATTAA TATAAAAATA AGCAATATGG CTGCCGATAT TGATTACTTC
ATTACCGCAA GTGTTGGTAT TACTATTTTC TATGGCCAGA GCAAAGTGCC CTCTGAACTA
CTTCAGCTTG CGGATCTGGC ATTGTATCAG GCTAAGAAAA ATGGCCGTGA TGATTCTGCT
ATGTTTGACC CTGTGATGCA GGAAAAATTA GATTACAGCA CTTGCTTAGA TAAAGAGTTA
CGTCAGTCTT TGAAACAAAA AGATTTTGTG CTGTATTACC AACCCCAATA CGATGCGAAG
CAAAACCTAG TGTCTGCCGA GGCTTTAATT CGCTGGAATC ATCCAGAATT AGGGCTGGTC
AACCCGGGTG ATTTTATCAA AGTGGCCGAA GAGTCCAACT TGATATTACC GATTGGTGAT
TGGGTATTAA GCGAAGCATG TCAGCAATTA AAAAAATGGC AATCTGATCC ACAATACCAG
CACTTGTCCT TATCCGTTAA TATCAGCGCT AAACAGATTT GGCAGAAAGA TTTTGTGGCG
GGTATAAAAA GGATTGTTTC TGATTCTGAT ATTAACGTGT CTAAATTAAA ATTAGAAATT
ACAGAATCTA TTTTATTAAG AGACATAAAT GGAACGGCAG AAAAACTTAA TGATCTGGTC
GCGTTTGGAT TAACCTTTTC TTTAGATGAT TTTGGAACAG GATATTCATC GTTGGGCTAT
TTAAAAAACT TACCCATTGA TGAACTTAAA ATTGACCAAT CCTTTATTCG TGACCTATTT
GATAATAAAA TGGATTTAAT TATGGTCAAA TCGATCATCG ATTTGGGTAA AAACTTTGGT
ATTAATGTTG TTGCTGAAGG GGTCGAGACT GAGGCTCATT TTGAAATTCT TAAGGAGTTT
GGTTGCAAAA TTTATCAAGG GTATTATTTC AGCCGTCCTG TTCCTGTTTC AGAGTTTGTC
ACTCTGATTT GA
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| Protein sequence | MDNALQLELN AEREKNKLLL NIVNSIPEPI MAKNWEGNFI FANKGIAELY STSPEEMIGK
EDSFFTGNKE QGQFFKENAQ SIMRRFETEM VYEDSTNART AEIRHYHSLK IPFKNNNDEL
NIVMFAKDIT EITALKNTAE ANAKRLGHVL EVSGEGMWDW NIQTNEVFQN QKWADITGVK
HSKRSFSEFQ DCLVEEDKKY VLTSLQALIE KKIPYDIEYR FRRPDGKVIW IWDRGQVLEY
DDQGKPKLLV GIMQDITEKK FNQSEIELMA FYDTLTMLPN RALLNDRLNL AIEHSKRFEK
YGAVLFLDLD NFKILNDSYG HQAGDDLLVI VAQRIQSVIR KDDTVARFGG DEFVIVLNEL
DSEPVKAAIK AQRLAQSICH SIKQKINIKI SNMAADIDYF ITASVGITIF YGQSKVPSEL
LQLADLALYQ AKKNGRDDSA MFDPVMQEKL DYSTCLDKEL RQSLKQKDFV LYYQPQYDAK
QNLVSAEALI RWNHPELGLV NPGDFIKVAE ESNLILPIGD WVLSEACQQL KKWQSDPQYQ
HLSLSVNISA KQIWQKDFVA GIKRIVSDSD INVSKLKLEI TESILLRDIN GTAEKLNDLV
AFGLTFSLDD FGTGYSSLGY LKNLPIDELK IDQSFIRDLF DNKMDLIMVK SIIDLGKNFG
INVVAEGVET EAHFEILKEF GCKIYQGYYF SRPVPVSEFV TLI
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