Gene Ping_2031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2031 
Symbol 
ID4624591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2477461 
End bp2478252 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content40% 
IMG OID639797189 
ProductAsp/Glu racemase 
Protein accessionYP_943391 
Protein GI119945711 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.329211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0464221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGA AAACCCAATT AACAGAACGA GAGAAATTTA CTGCTTTGGA GGTGAATGCG 
AGTTATGTAT CAGCCCCAAG AATGTCACGC AAGCATATTG GTTTAGTGCA ACTAAGTACA
GATCATACCT TAGAAATGGA TTGGGCGAAA TTGATTGGCG AACAAGCAGC CGTGTTTAGT
TCAAGGGTTT ATTATAGTGG TGATATGCGA CCGGCTGCGC TAGATACAAT TGCAACCGGT
ATATCAAAGA CAGCTCAGTT AATTGCAACT GATTTACCTA TGGATGTTAT GGCATTCGGC
TGCACATCTG CAACGATGGT GATCGGTGAA AATAGAGTAG GGCAGTTGTT ACGTGAAGGT
CGTGGTGATA TTCCAACAAC GAATCCTTGG ACTGCCGCAC AAGCCGCATT TAAAAAACTG
GGCGCAAAAA AAATTGCAAT ATTTTCACCT TATCCGTCAG ATGTTAATTT CTTTCTTTAT
CAGCAATTAA TGAAAGCAGG CTTTGAGATT GTTGCATTAA CCTCTCTAGG TATAAAAAAA
GATACAGAGA TCACCACTAT TTCAAAACAA TCTATGATTG ATGCGCTTGA TAAAATGCTT
ATCAATAGTG ATGCGGACTT AGTGTTTATG TCTTGCACTA ATTTGCGTGT ACTGGATCAT
ATTGAGCTTT TCGAATCTAT GTATAAACGT CCATTTGTAA GCAGTAATTC AGCTATGTTT
TGGCATGCTA TGGCACTAAC GGGGACAAAT GCTCATTGCC CTGGTTTTGG GCGTCTACTT
AACGCTAATT AG
 
Protein sequence
MNQKTQLTER EKFTALEVNA SYVSAPRMSR KHIGLVQLST DHTLEMDWAK LIGEQAAVFS 
SRVYYSGDMR PAALDTIATG ISKTAQLIAT DLPMDVMAFG CTSATMVIGE NRVGQLLREG
RGDIPTTNPW TAAQAAFKKL GAKKIAIFSP YPSDVNFFLY QQLMKAGFEI VALTSLGIKK
DTEITTISKQ SMIDALDKML INSDADLVFM SCTNLRVLDH IELFESMYKR PFVSSNSAMF
WHAMALTGTN AHCPGFGRLL NAN