Gene Ping_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2028 
Symbol 
ID4624588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2474544 
End bp2475215 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content35% 
IMG OID639797186 
ProductYheO domain-containing protein 
Protein accessionYP_943388 
Protein GI119945708 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0390581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0444206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATA TAGGCTTGAA CATAACCCAA AAAAAACTGA GTCCAGAAGA TAAAATGAAG 
CTAGAAAGTT ATTTCCCTCT GGCTGATACT ATCGTTTCTT TAATTGGAGA ACATTGCGAA
ATTGTTATTC ATTCTCTAGA CGAATTAGAA CGTTCTGTTG TCAAGATATC AAACGGCAGT
ATTACAGGCC GTAAAGTAGG TAGCCCAATT ACAGACTTGG GCCTTAAAAT GCTTGCGCAA
TATGAAAAAA ATAAAAACCA AGTCCAAGAA GGGTATTTTG CCAAAAATGC AAATGGCGAT
GAGCTCAAAT CAGCTACCTT TGTGATCACT GGCTTAAAAG GACAGCCAAT AGGTTTATTC
TGTATGAATA TAAACCTATC GGCACCTTTT AATGAAGTAT TAAAAGCATT TTTGCCAAGT
GTTGATAGCC TCCCTGTACA AGAGTTATTT AGCTCTAACG CGACTGATGT TATTAACGAA
TCGCTTAAAA AAACCATTAT TGATGTCGAC AACGACAATA AGATAATGCT TAAACAACGA
AACAAAGAAA TAACACGTAG ATTATTCGAA AACGGTATTT TTGAATTAAA AGAAGCAACA
CAACTTGTTG CTCTTGAGCT CAAGATATCA AAACATGCAA TTTATAAATA CATTCGTGAA
TTTAAATCCT AG
 
Protein sequence
MDDIGLNITQ KKLSPEDKMK LESYFPLADT IVSLIGEHCE IVIHSLDELE RSVVKISNGS 
ITGRKVGSPI TDLGLKMLAQ YEKNKNQVQE GYFAKNANGD ELKSATFVIT GLKGQPIGLF
CMNINLSAPF NEVLKAFLPS VDSLPVQELF SSNATDVINE SLKKTIIDVD NDNKIMLKQR
NKEITRRLFE NGIFELKEAT QLVALELKIS KHAIYKYIRE FKS