| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2025 |
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| Symbol | |
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| ID | 4624708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2469736 |
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| End bp | 2470908 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639797183 |
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| Product | cyclic-di-GMP regulatory protein |
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| Protein accession | YP_943385 |
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| Protein GI | 119945705 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.100945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0489408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTTA TTAAAAAACT CTTAGTGGTT GATGACGAAA TTGACTTTGC AAAATTTGTT
AAGGATGTCG CTGAAGACTT GGATTTCGAG GTTTTATTAA CCGATAATCC TGTGGAGTTC
AGTAGCCTGT ATTGCAACAA CATTGACATT GTTGTTCTTG ATTTATTTAT GCCCGGAACC
GATGGTATTG AACTGCTCAG GTACTTAGCA GATAACAATA GCCACGCATC TGTTATTTTT
ATGAGTGGAA GAAACAGCAG TGTGCTTCAT TCAGCAAAGG AGTTAGCTTC CGAACAAGGC
ATCAGCGTAT TAGGCACGCT TCAAAAGCCG TTTAGGGCAA AGGAATTAGA GGATGTTTTA
AATAAATATA TTAAATATTC TCCCATATTT GCTGTTAATA ACGACTTAGC TTCCGTGGAA
GAGCTTGCTC AGGCCATAAA AGAGAAGGCA TTATTTCTTG TCTACCAACC CCAGGTCACA
ATAAGTGACA GAGAGGTAGT TGGTGTTGAG GCGCTCGTTC GCTGGAAACA TCCGACCAAA
GGAATGATTC CTCCAGACTA TTTTATTCCA ATGGCAGAAG AAAATGGCTT AATTGCAGCT
ATTACGATGT TTACTACTAA GACAGCTATT CGCCAGCAAG GAATATGGAG AACCCAAGGC
CGCAATATGC GAATGTCAAT CAATATGTCT CCCAAAATCC TTGATGATCT GGACCTGCCG
AGTAAAATTG AAGCTTGCGT TAAAGCGCTG GGTGCTGATA TTTCAAAACT GGTGATTGAG
GTAACAGAGA CAGCTCTGAC AACTAACCTT GCTCTATACA TGGATATATT GGCACGTTTA
CGCATGAAAG GCTTCGGGAT CTCTATCGAT GACTTCGGAA CCGGATACTC GTCCCTGCAA
CAACTCATTC GCGCCCCTTT TACTGAACTG AAAATTGATC GGGCTTTTAT TCGAAACATA
AAGACAGACA AGGAATCCTA TACGATCAGT AAAATATCTA TCATGCTTGC ACATGAGTTT
GGGATGAAAG CCGTTGCTGA GGGAATTGAA ACCGAGGCCG AGTGGAATAT ATTAAAACAA
CTCGGCTGTG ACGAAGGCCA AGGATATTGG ATCGGCAGAC CTATGCCCCC TGAGGAAATC
GAGTCGTGGA TTAAAAGTTG GTCAGCTGAC TGA
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| Protein sequence | MMVIKKLLVV DDEIDFAKFV KDVAEDLDFE VLLTDNPVEF SSLYCNNIDI VVLDLFMPGT
DGIELLRYLA DNNSHASVIF MSGRNSSVLH SAKELASEQG ISVLGTLQKP FRAKELEDVL
NKYIKYSPIF AVNNDLASVE ELAQAIKEKA LFLVYQPQVT ISDREVVGVE ALVRWKHPTK
GMIPPDYFIP MAEENGLIAA ITMFTTKTAI RQQGIWRTQG RNMRMSINMS PKILDDLDLP
SKIEACVKAL GADISKLVIE VTETALTTNL ALYMDILARL RMKGFGISID DFGTGYSSLQ
QLIRAPFTEL KIDRAFIRNI KTDKESYTIS KISIMLAHEF GMKAVAEGIE TEAEWNILKQ
LGCDEGQGYW IGRPMPPEEI ESWIKSWSAD
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