Gene Ping_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2005 
Symbol 
ID4627211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2438340 
End bp2439452 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content35% 
IMG OID639797166 
Productstress protein, tellurium resistance protein TerD 
Protein accessionYP_943368 
Protein GI119945688 
COG category[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
[COG4110] Uncharacterized protein involved in stress response 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.432333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGT TAATAATTGG TGCGAATAGT GCCTTATCTA CACTTCAATT TACTTTAAAC 
CACAACTTAC CCAGGAAAAC AGATGTGTCT GTTTTTTGCT TAAATGCAAA TGGGAAAGTA
AATGGTGATG AAGGAATGGT TTTTTACGGT GCACCTAATT CAGTATGTGG TTCGGTCAAA
ATAAGCGATA GCTCAATTGA ATTTGATCTC AATACTGTCC CAAGTAACAT TAAAAATTTT
GCGATAACGG CAACATTAGA TCAGGGAGTT TTTGGAGAGC AGGATGACAT TAAATTAAAA
GGAACTGATT TTGAATGTTT ATTAGAAACA CAAGATCGTT CCGAAAAAGC GCTCATTCTT
TTAGATATTT ACAAACATAA TAATGCATGG AAAGTACGTT TTGTGGGACA GGGATTTAAT
GGTGGACTGC AGCCTTTAGC TGAATTATAT GGCGTTGATG TTGCTAATGA TACTGGTACT
GATGGTACTG ATGTTGCTGA TCAAACTCCG CGTCCTAAGC CAATTGCTCC ACCTATCAAT
CTTAGTAAAA TAAGCCTCAC TAAATCAGCA CCCAAAGTTG ATTTACCCAA ACGCGCTGGT
GATTTAGGTT TAATCAAAGT AAATTTAAAT TGGAATAAAA AAGCGGGTGG TTTCTTCGCT
TCTAAAACTG ACTTATATTT TGGGGCATTT ATTGAATTAA ATAATGGTGA CCGTAAAATT
ATACAAGTTT TAGGGAATAG CTTTGAATTT TCCCCTTATA TAAAATTGTT AGCTAATGAT
CGGACAGGGG CAAGCCAAAA TGGTGCATGG TTACATATTG ATGGAGATAA ACTCCAAGAT
GTAAAACAGA TTGTTATTTT TACTTTTATT TATAAAGGCG TTGCTAATTG GGATAAAATA
GGTGCACAAG TTACTTTGCA TGTTCCTGGC ATGCCGCCTA TTGAAACTAA ATTGACAGAG
CAGAATAAAA ATAAAAATTT TTGTGCTGTT GCGGCAATTT CTGTCAATAA TGGTTTTGTT
AATGTAGAAC AATTAAATCG ATTATTTTCG GGGCACGAAG AATGTGACGC AGCCTTCGGA
TGGGGATTTA ACTGGAAATT TGGCACTGAA TAA
 
Protein sequence
MKMLIIGANS ALSTLQFTLN HNLPRKTDVS VFCLNANGKV NGDEGMVFYG APNSVCGSVK 
ISDSSIEFDL NTVPSNIKNF AITATLDQGV FGEQDDIKLK GTDFECLLET QDRSEKALIL
LDIYKHNNAW KVRFVGQGFN GGLQPLAELY GVDVANDTGT DGTDVADQTP RPKPIAPPIN
LSKISLTKSA PKVDLPKRAG DLGLIKVNLN WNKKAGGFFA SKTDLYFGAF IELNNGDRKI
IQVLGNSFEF SPYIKLLAND RTGASQNGAW LHIDGDKLQD VKQIVIFTFI YKGVANWDKI
GAQVTLHVPG MPPIETKLTE QNKNKNFCAV AAISVNNGFV NVEQLNRLFS GHEECDAAFG
WGFNWKFGTE