Gene Ping_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1999 
Symbol 
ID4627205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2430517 
End bp2432181 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content42% 
IMG OID639797161 
Productpeptide synthase 
Protein accessionYP_943363 
Protein GI119945683 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC ATCAATACTG CAACTTTTGC CGTCATTTAA TCGATGCGGC AACGGCTTTC 
CCTGACTCCC TAGCAGTTGC GGTTCAAAAA AAACGATTTA ATAAGCTGAC TTATCAGGAG
ATAGATTTTT CCACCCTGAA TAAACGCAGT GATCGAATAG CCCATGCACT GAATCAATTT
GGCTTAAAAA GTGGCGATAA AGCGGTCTTA ATGGTCAAAC CCAGTGTAGA CTTTTTTGCA
TTAACCTTTG CACTGTTCAA AGCGGGAATA GTACCGATAT TAATAGATCC TGGAATGGGC
ATTAAAAACC TCAAACAGTG TATCGCAGAA GTACATCCGG ACGCTTTTAT TGGTATTCCC
AAAGCACATA TTGCCCGGCG ACTATTCGGC TGGGGCAAAG ACGCCATTAA ATACAATATT
ACCGTAGGGG GGGCCAGTTT TTGGGGAGGT ACTAGCCTAA CTCAAATAAT TGATCATTGC
AGCGCACAAA CCCCCTACCC CATGGTTAAA CTTACACCGG ATCAAATGGC GGCCATTTTA
TTTACCAGCG GCAGTACGGG CTCACCTAAA GGGGTTGTTT ATACCCACCG AATGTTTGAA
GCGCAAATCA CCGTCTTAAG AAATGATTAT GGGATAACCC ATGGAGAACG GGACTTAGCG
ACCTTTCCTT TGTTTTCACT TTTTGGTCCG GCACTGGGTA TGGCATCAAT TATTCCAGCA
ATGGATGCCA GTAAACCGAT AACCGCCAAT CCCGATTATA TTTTTGCTGC CATTAACAAA
TATCACTGTA CCAACCTTTT TGCCAATCCG GCATTAATAG AGTTATTAGG CCGTGCGGGT
AAGTCACGCG CGATGAAACT GCAAAGTCTG CAGCGCGTTA TCTCAGCGGG TGCACCCGCA
ACCTTGTCTT CCATTGAACG GTTCACTACG TTACTTAACC CAGGGGTAGA AATTCTCACT
TCTTACGGTG CAACCGAAGC CTTACCAGTC AGTAAAATTG GCAGCGTAGC CTTACTCAAA
ACAACAGACA TCACCGATGC AGGCGGCGGG ATTTGTGTTG GTTATCCCGT TGATGGTATG
ACTGTTTCTA TTATTAACAT CACCGAAAAA ACCATCACAA CCTGGCAAGA TGATCTTAGA
TTGCCGGCCT ATGAAATCGG TGAGATTGTG GTTCAGGGCC CACAAGTAAG CCAGTGCTAT
TATCAACGAA AAAATGCTAC ACTTGCCGCT AAAATAGAAG ATATTAAAAG ACCACACCAC
CGTATGGGTG ATTTAGGTTA TCTCGATTCC GATGGGCAAT TATGGATGTG TGGCCGAAAA
GCACATCGTG TTGATGCCAA TCATCTTAAA ATTAAAAAAA GTTATTATTC CATTCCCTGT
GAACGTATTT TTAATACTCA TCCAGCCATT AAACGCAGTG CATTGGTTGC TGTCAAAATA
GATGGAAAAA CAACCCCTTT ATTATGTATT GAGCTGTATA ATAAATCTGC ACAAACAGCT
GAAACGTTAT TTGCAGAGTT GCATAAAATA GCCGATAAGC ATAATCAAAC AGTAGGTATT
ACACTGTTTT TAATTCATAA AAAATTCCCC ATGGATATTC GCCATAACGC AAAAATATAC
CGTGAAAAAT TAGCCATTTG GGCAGAAAAA CAACTAATAG ATTAA
 
Protein sequence
MSDHQYCNFC RHLIDAATAF PDSLAVAVQK KRFNKLTYQE IDFSTLNKRS DRIAHALNQF 
GLKSGDKAVL MVKPSVDFFA LTFALFKAGI VPILIDPGMG IKNLKQCIAE VHPDAFIGIP
KAHIARRLFG WGKDAIKYNI TVGGASFWGG TSLTQIIDHC SAQTPYPMVK LTPDQMAAIL
FTSGSTGSPK GVVYTHRMFE AQITVLRNDY GITHGERDLA TFPLFSLFGP ALGMASIIPA
MDASKPITAN PDYIFAAINK YHCTNLFANP ALIELLGRAG KSRAMKLQSL QRVISAGAPA
TLSSIERFTT LLNPGVEILT SYGATEALPV SKIGSVALLK TTDITDAGGG ICVGYPVDGM
TVSIINITEK TITTWQDDLR LPAYEIGEIV VQGPQVSQCY YQRKNATLAA KIEDIKRPHH
RMGDLGYLDS DGQLWMCGRK AHRVDANHLK IKKSYYSIPC ERIFNTHPAI KRSALVAVKI
DGKTTPLLCI ELYNKSAQTA ETLFAELHKI ADKHNQTVGI TLFLIHKKFP MDIRHNAKIY
REKLAIWAEK QLID