Gene Ping_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1997 
Symbol 
ID4627203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2428581 
End bp2429630 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content47% 
IMG OID639797159 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_943361 
Protein GI119945681 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.634793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.43356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACT CTAACGTTTT TATCAATAGT TTATCTTACG AATTGGCCCC CCAGGTCATT 
TCAAGCGTTG AATTAGAATC ACGCCTTGCG CCCTTGTATC AAAAGCTGCG TATCCCGATG
GGACAACTGT CTGCCTTAAC CGGTATTCAA GAACGGCGCT GGTGGCCAAC TGATCATATT
TTATCCGATG GTGCGATAGC GGCTGCACGC AAAGCAATTG CCGAAACCGC CATCGATATT
AATGATCTGG GGGCGGTTGT TTATACAGGC GTCTGTCGGG ATCAACACGA ACCCGCCACG
GCTTGCCGTA TTGCTGCCGC ACTCGGTGTG AATAACAGTA CAGCAATCTA TGATATCAGT
AATGCTTGTT TAGGGGTTTT ATCCGGCATA TTAGATATTG CCAATCGTAT TGAGCTTGGG
CAAATCAAAG CAGGATTAGT TGTCTCCTGT GAATCAGCCC GGCACATTGT TGATATTACG
ATTGCAAATA TGCTTGAAAA TAAAACCATT CAAAATTACT CGCAATCTTT AGCAACCTTA
ACGGGTGGCT CTGGTGCCGT GGCGGTTTTA TTAACCGATG GTTCACTGCC GCTTAAAAAT
ACTCGCCAGC ATAAATTACT AGGTGCGAGC CATCTTTCTG CCTCTGAGCA CCATGACTTA
TGTAAATGGG GTTCACATCC AGTGGGTTTA AACCTGCACC GTGAATATAT GCGTACGAGT
GCCGTTCCGC TTCTTAAAGA AGGAGTCGCA CTGGCTTTGC AGACCTGGCA ACACTTTTTG
CAGCAACGCG ACTGGTCGGT CGAACAAGTT GATAAAGTCA TTTGCCATCA GGTCGGCTCA
GCAAATCAGA AAAAGGTGTT AGCCGCATTG AACATACCCC CTCACAAAGA GTTTCCCACT
TTCCAAAAAT TGGGCAACAT GGGTACGGTG TCGCTACCAG TCACCGCCGC GATAGCGCAT
GATCAGGGAT TTCTGGTTAA AGGCGATAAA GTGAGCTTTT TGGGCATAGG CAGCGGACTG
AACTGCATGA TGTTAGGACT TGAGTGGTAA
 
Protein sequence
MKYSNVFINS LSYELAPQVI SSVELESRLA PLYQKLRIPM GQLSALTGIQ ERRWWPTDHI 
LSDGAIAAAR KAIAETAIDI NDLGAVVYTG VCRDQHEPAT ACRIAAALGV NNSTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGLVVSC ESARHIVDIT IANMLENKTI QNYSQSLATL
TGGSGAVAVL LTDGSLPLKN TRQHKLLGAS HLSASEHHDL CKWGSHPVGL NLHREYMRTS
AVPLLKEGVA LALQTWQHFL QQRDWSVEQV DKVICHQVGS ANQKKVLAAL NIPPHKEFPT
FQKLGNMGTV SLPVTAAIAH DQGFLVKGDK VSFLGIGSGL NCMMLGLEW