Gene Ping_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1995 
Symbol 
ID4627201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2424993 
End bp2426207 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content43% 
IMG OID639797157 
Productbeta-ketoacyl synthase 
Protein accessionYP_943359 
Protein GI119945679 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.566366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.512838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAG CAGTAATTAC AGGTATTGGT ATTGTTTCTA GTATTGGTAA CAACAAAGAA 
GAAGTTTTAG CGTCACTTAA AAGCGGCAAA TCAGGCATCA GCTTCTCGGA GCAATTTGCT
GAGATGAAAA TGCGCAGTCA GGTTTGGGGC GATCTAAAAA TTGAGCCTAA AGATCATATT
GACCGTAAAA TCATGCGTTT TATGGGTGAT GCTGCTGCTT ATGCTTATCT TTCTATGGAA
CAAGCTATTG CCGATGCGCA GTTAACCGAT GACCTGGTGT CTAATGAACG TACTGGTTTA
GTGGCTGGAT CCGGCGGTGG TTCTTCTAAA AATCAGGTTG AAGCCTGCAA ACTGATGGTT
GAAAAAGGCG TACGTCGTGT CGGTCCTTAT ATGGTCCCTC GTACGATGGC GAGCACAACA
TCTGCCTGTC TCGCAACCCC GTTCAAAATT AAAGGTATTA ACTATTCAAT GAGCAGCGCT
TGTGCAACCA GCTCTCACTG TATTGGTAAT GCACTGGAAC AAATTCAATT AGGTAAACAG
GATATTGTGT TTGCTGGTGG TGGTGAAGAA TTAGACTGGA CTATGGCATG CGAATTTGAT
GCGATGGGTG CACTATCAAG CAAATTTAAT GACACACCTT CTAGCGCATC GCGAACTTAT
GATGCAAAGC GCGATGGTTT TGTTATTTCT GGCGGTGGCG GTATGGTTGT GGTTGAAGAG
CTTGAGCATG CTTTAGCGCG TGGCGCAAAA ATTTATGCGG AGATTGTGGG CTACGGCGCA
ACATCTGATG GCTATGATAT GGTTGCACCC TCGGGTGAAG GTGCTGTGCG CTGTATGCGT
CAAGCACTTG CAACCGTTGA TGGTGAGGTT GATTACTTAA ATACACACGG TACTTCGACC
CCCGTTGGTG ATACTAAAGA ATTAGAAGCT ATTAATATTG TATTTCCTGA TAAAGCGCCA
AAAATCAGTG CAACTAAATC TCAAACAGGT CATTCACTTG GCGCCGCGGG TGTTCATGAA
ACAATCTATA GTTTGCTAAT GATGGAAAAT GATTTTATTT CACCTTCTAT TAATATTGAT
GAGATAGATG AAAAAGCGGT GAATCTACCG ATCGTGGCCA ATAAGGCTGT TGATGCAAAA
CTAAACATTG TAATGTCCAA TAGTTTTGGT TTTGGTGGCA CTAACGCAAC ATTAGTTTTC
AAACGTTTCT CTTAG
 
Protein sequence
MKRAVITGIG IVSSIGNNKE EVLASLKSGK SGISFSEQFA EMKMRSQVWG DLKIEPKDHI 
DRKIMRFMGD AAAYAYLSME QAIADAQLTD DLVSNERTGL VAGSGGGSSK NQVEACKLMV
EKGVRRVGPY MVPRTMASTT SACLATPFKI KGINYSMSSA CATSSHCIGN ALEQIQLGKQ
DIVFAGGGEE LDWTMACEFD AMGALSSKFN DTPSSASRTY DAKRDGFVIS GGGGMVVVEE
LEHALARGAK IYAEIVGYGA TSDGYDMVAP SGEGAVRCMR QALATVDGEV DYLNTHGTST
PVGDTKELEA INIVFPDKAP KISATKSQTG HSLGAAGVHE TIYSLLMMEN DFISPSINID
EIDEKAVNLP IVANKAVDAK LNIVMSNSFG FGGTNATLVF KRFS