Gene Ping_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1994 
Symbol 
ID4627238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2423727 
End bp2424878 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content41% 
IMG OID639797156 
Producterythronate-4-phosphate dehydrogenase 
Protein accessionYP_943358 
Protein GI119945678 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.569403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.498475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAT ATATTGATGA AAATATCCCC TACGCGCGGG ATTTTTTTAC TGGACATGGC 
AATCTGCATT TTTTTTCGGG TCGCAATGCC AGCGCAGAAC AACTTATTGA TGCTGATGTT
TTACTGGTTC GTTCGATTAC AGAGGTTAAT GAAAAATTAC TCAGCTTAAA TAAAAAACTT
AAGTTTGTTG GCACTGCAAC CATTGGCACA GATCATATCG ATCAGACTTA CCTCAAAAAC
AGAGGTATTG TTTTTAGCAG TGCGCCAGGC TGTAACAAAG TGTCTGTTGC GGAATATATT
TTAAGCAGTT TACTGGTGCT GGCAGACCAG CAACAATTTA TTTTAAGCGA TAAAAGTATT
GCTATAGTGG GTGCTGGCAA TACGGGGACT GCAGTGTACC AACGCTTAAA TGCATTGGGA
ATGAACTGTA AGCTTTACGA TCCACCTCTG CTGTTGGCGG GTGATAAACG GCAATTTTGT
ACCTTTGAGG AGGTACTTGA AGCCGATATC ATTAGTTTGC ATGTCCCTAA GGTAGTGCAG
GGGCCATTTC CAACCGTGCA TATGTTTGAT AGTAAGGTCT TAAGTCAACT TACCAACGGA
CAAATATTAT TAAATGCAGC ACGTGGTGAT CTTATTGATA ATCAAGCTTT ATTAGAACTT
GCCGAGCAGG GTTTAACGCC GACTTTAGTG CTTGATGTCT GGGAAAATGA GCCGCATATT
AATCAACAAT TATTACCCTA TGTGGCAATC GCAACACCGC ATATTGCAGG ATACAGCCTG
GATGGGCGTG TACGTGGTAC TGAGATGTTA TACCAGGCAC TGTGCGATTT TTTGCAGCTA
AAGGGAAAAT ATACCACGGC GGATTTTGTT CACCGTGCCG CTATCAATAG CGTCTCTATT
TCCAAAAAAA TCGATCAACC ACTGATCAAA TCATTAATGC ACCTGATATT TGATGTGCGC
CGGGATGATG CCCTGTTCAG AGAAATGATT GAAGATGTTG ATGGTTTTGA TACTATGCGC
AAAACATACC AGGAACGCCG GGAACTATCG ACTTTAACCG TTGAGTCAAG CGTTGAACAA
AATACATTAT TACAGTTGTT AGGTTTTTCT ACCAACGTAC AAAATGAGAT AAAGGAAACA
CATGAAATCT GA
 
Protein sequence
MNIYIDENIP YARDFFTGHG NLHFFSGRNA SAEQLIDADV LLVRSITEVN EKLLSLNKKL 
KFVGTATIGT DHIDQTYLKN RGIVFSSAPG CNKVSVAEYI LSSLLVLADQ QQFILSDKSI
AIVGAGNTGT AVYQRLNALG MNCKLYDPPL LLAGDKRQFC TFEEVLEADI ISLHVPKVVQ
GPFPTVHMFD SKVLSQLTNG QILLNAARGD LIDNQALLEL AEQGLTPTLV LDVWENEPHI
NQQLLPYVAI ATPHIAGYSL DGRVRGTEML YQALCDFLQL KGKYTTADFV HRAAINSVSI
SKKIDQPLIK SLMHLIFDVR RDDALFREMI EDVDGFDTMR KTYQERRELS TLTVESSVEQ
NTLLQLLGFS TNVQNEIKET HEI